Name : Elen_1917 (Elen_1917) Accession : YP_003182270.1 Strain : Eggerthella lenta DSM 2243 Genome accession: NC_013204 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2249012 - 2250328 bp Length : 1317 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: ftn:FTN_1426 UDP-glucose/GDP-mannose dehydrogenase DNA sequence : GTGAGCGTGTACCAAGATTTGGTCGAGCGGAAGACGAAGCTATCCCTTATCGGACTGGGATATGTTGGCATGCCGATAGC GGTTGAGTTCGCTAAGCATATCGAAGTTGTCGGATTCGATGTCAACGAAGAGAAAATCCGCTTGTACCGAAAGGGGGTCG ATCCGACGAAAGAAGTAGGCGACGAGGCGATCAGCTCCACAGGCGTCGACTTCACGTCGAATCCCGAACGTTTACGGGAA GCGCGTTTTCATATAGTTGCTGTTCCTACTCCGATCAATCAGGACAAGACCCCCGATCTGTCGCCGGTTGTTGGGGCGTC GACCATGCTTGGCCGTCACCTTGAATGGGGTTCGATCGTGGTTTTCGAATCTACCGTCTATCCTGGGGTCACGGAGGACG TATGCGTTCCTATCCTTGAGAGGGAATCCGGATTGCGGTGCGGCGTTGATTTCAAAGTGGGTTACAGTCCTGAGCGAATC AACCCCGGGGACAAAGTCCATACCTTGACCACTATCCGAAAAATCGTTTCGGGCATGGATGATGAGTCCCTTGAAGAAAT CAAACGCGTGTACGACATCGTGATAGAGGCAGGCACCTATCCGGTCTCCTCGATCAAAACAGCTGAAGCAATTAAGGTAG TGGAGAACTCCCAGCGCGATATCAATATTGCCTTCATGAACGAGCTTGCCATGGTCTTCGACCGCATGGGTATCGATACG AGCGAAGTCGTGGAGGGCATGAACACGAAGTGGAATGCGCTCGGCTTTAAACCAGGACTGGTTGGTGGGCATTGCATCGG CGTTGATCCGTATTACTTTACCTACGAGGCCGAGAAGCTCGGTTACCACTCTCAGATCATTCTTTCGGGCAGAAGAGTGA ACGATGCCATGGGAGGGTTTGTTGCCGAGACGGCCATCAGGGAGATGGTGCGAGTTGGGCTTGCTCCCAAGTCCTCGAAC GTGGTCGTCTTGGGCATTACCTTCAAAGAGAACTGTCCCGATGTTCGAAATTCCAAGGTGTACGACATTGTCATGAGGCT AAAGGAATATGGAGTCGAGCCGTCGGTGGTGGATCCTTGGGCTTCGGGAGACGAGGTGAAGCAGGTTTACGGCATGCAGC TACGCGAGTCGGGTGATATTGCGAACGCAGATTGCCTGATTGTCGCGGTTGCCCATGATGAGTTCAAAGAGCTGGGCTTC GAGCGTATTGATGCTTTCTTCGGAGACAAGCCCGACGAAAGCAAGGTGCTTTTGGATGTTAAAGGAATATTGGACGCGAA GCGCTTCTCGTCTTATGGAAGCTTTTGGCGGCTATGA Protein sequence : MSVYQDLVERKTKLSLIGLGYVGMPIAVEFAKHIEVVGFDVNEEKIRLYRKGVDPTKEVGDEAISSTGVDFTSNPERLRE ARFHIVAVPTPINQDKTPDLSPVVGASTMLGRHLEWGSIVVFESTVYPGVTEDVCVPILERESGLRCGVDFKVGYSPERI NPGDKVHTLTTIRKIVSGMDDESLEEIKRVYDIVIEAGTYPVSSIKTAEAIKVVENSQRDINIAFMNELAMVFDRMGIDT SEVVEGMNTKWNALGFKPGLVGGHCIGVDPYYFTYEAEKLGYHSQIILSGRRVNDAMGGFVAETAIREMVRVGLAPKSSN VVVLGITFKENCPDVRNSKVYDIVMRLKEYGVEPSVVDPWASGDEVKQVYGMQLRESGDIANADCLIVAVAHDEFKELGF ERIDAFFGDKPDESKVLLDVKGILDAKRFSSYGSFWRL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-97 | 51 |
tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-97 | 51 |
cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-103 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Elen_1917 | YP_003182270.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 5e-98 | 51 |