Gene Information

Name : Elen_1109 (Elen_1109)
Accession : YP_003181469.1
Strain : Eggerthella lenta DSM 2243
Genome accession: NC_013204
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1340161 - 1341051 bp
Length : 891 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGCAGAGCAGGCTCACGGCACGCTGAAGGTGAAGACCGGGTTCGCGGAGATGATGAAGGGCGGCGTCATCATGGACGT
CGTGAACCCCGAGCAGGCGAAGATCGCCGAGGACGCGGGCGCGGTGGCCGTCATGGCTCTGGAGCGCGTTCCCGCCGACA
TCCGCGCGCACGGCGGCGTGGCCCGCATGAGCGACCCCACCATGATCGAGGGCATCGTGGAGGCCGTGTCCATCCCCGTC
ATGGCGAAGTGCCGTATCGGGCATTTCGTGGAGGCGCAGGTGCTGCAGAGCCTGGGCGTGGACTTCATCGACGAGAGCGA
GGTACTCACCCCGGCCGACGACGAGTACCATGTGAACAAATGGGACTTCGACGTGCCGTTCGTGTGCGGCGCGCGCAACC
TGGGCGAGGCTCTGCGCCGCATCGCCGAGGGCGCGGCCATGATCCGCACGAAGGGCGAGCCGGGCACGGGCAACGTGGTG
GAGGCCGTGCGCCACATGCGCACCGTGACCACCGACATCGCCCGCATCAAGGGCCTGCGCGACGAGCAGCTGTTCACGGC
TGCGAAGGACCTGCAGGCGCCCTACGAGCTGGTGAAGTGGGTGGCCGAGCACGGGTGCCTCCCCGTGGTGAACTTCTCGG
CCGGCGGCATCGCCACGCCCGCCGACGCGGCGCTGATGATGCAGCTGGGCTGCGACGGCGTGTTCGTGGGCAGCGGCATC
TTCAAGTCGGGCGATCCAGCCAAGCGCGCCCGGGCCATCGTGGAGGCCACGACGAACTACGACGACCCCGACACCATCGC
CCGCGTCTCGCGCGATCTGGGCGAGGCCATGGTGGGCATCGAGATCTCGGACATTCCCGAGAACGAGCTCATGGCCGGCC
GCGGCTGGTAA

Protein sequence :
MAEQAHGTLKVKTGFAEMMKGGVIMDVVNPEQAKIAEDAGAVAVMALERVPADIRAHGGVARMSDPTMIEGIVEAVSIPV
MAKCRIGHFVEAQVLQSLGVDFIDESEVLTPADDEYHVNKWDFDVPFVCGARNLGEALRRIAEGAAMIRTKGEPGTGNVV
EAVRHMRTVTTDIARIKGLRDEQLFTAAKDLQAPYELVKWVAEHGCLPVVNFSAGGIATPADAALMMQLGCDGVFVGSGI
FKSGDPAKRARAIVEATTNYDDPDTIARVSRDLGEAMVGIEISDIPENELMAGRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-101 71
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-101 71
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-101 71