Gene Information

Name : Apar_0407 (Apar_0407)
Accession : YP_003179429.1
Strain : Atopobium parvulum DSM 20469
Genome accession: NC_013203
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 470400 - 471053 bp
Length : 654 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0281 ABC transporter ATP-binding protein

DNA sequence : 
ATGTATACGTTTCTAAAGGTAGATGCTCTTAACAAGTCATTTGGAAGTAACACGGTTCTTCATAACATTTCATTTGAGAT
ACAGAGTGGAGAGTCAGTGGCTCTTGTGGGACCTTCTGGTTGCGGAAAATCAACACTTCTTAATATCATTGGTCTTCTCG
AGACTTTAGACTCAGGCATAATTAGCCTTGAAGGCAGAGCATACCCTTCAATCAATAGCAAAAAAGCAACACTTATGAGG
CGCACTGAGATCAATTATCTATTTCAATCTTTTGCTCTCATTAATGACTGGAAAGTAAGCAAAAATCTCTTATTAGCGCT
TCAATACACTAAACTGTCAAAGCAGGAGCAAGAGCGTCTTATTAGAACTGCTTTGGAAAGCTATGGAATTGGCGAGAAGT
ACGATGCGGTTGTAAATGAGCTTTCTGGTGGAGAAAAGCAGAGGGTAGCAATTGCTCGAGCAATGATAAAACCAGGTAAT
TTAATCCTTGCTGATGAACCAACCGGATCGCTTGATAAGGCTATGGCCACTATTGTCATAGATAGTTTGCTAGACTCCGT
TCACGCAAACCATAAAACGCTTCTTATGGTCACGCATGATATGAATATTGCTCAACGTTGTGACCGAATTATTGAATTGC
CAAAACATCAATAG

Protein sequence : 
MYTFLKVDALNKSFGSNTVLHNISFEIQSGESVALVGPSGCGKSTLLNIIGLLETLDSGIISLEGRAYPSINSKKATLMR
RTEINYLFQSFALINDWKVSKNLLLALQYTKLSKQEQERLIRTALESYGIGEKYDAVVNELSGGEKQRVAIARAMIKPGN
LILADEPTGSLDKAMATIVIDSLLDSVHANHKTLLMVTHDMNIAQRCDRIIELPKHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-42 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Apar_0407 YP_003179429.1 ABC transporter-like protein NC_012469.1.7686946. Protein 9e-35 46
Apar_0407 YP_003179429.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-29 42
Apar_0407 YP_003179429.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-30 41