Gene Information

Name : Apar_0331 (Apar_0331)
Accession : YP_003179353.1
Strain : Atopobium parvulum DSM 20469
Genome accession: NC_013203
Putative virulence/resistance : Unknown
Product : putative L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 5.1.3.22
Position : 379035 - 379883 bp
Length : 849 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
ATGTCCAAGTATCAGCTAGGACTTTATGAGAAGGCCACTCCAACTGATCTTTCTTGGGAAGAGCGCCTCAGCATAGCAGG
AGAGTCTGGCTTTGATTATGTTGAGATCTCCGTTGATGAGTCTGACGCTCGTCTTTCTCGCCTTGAATGGAGCGGTGAGG
AGCGTGCAGCAGTTTGTCAGGCAATGGTAAACTCTGGTGTTCGCCTGGGCTCTATGTGCCTTTCTGGTCATCGTAAGTAC
CCTTTTGGTTCTCGTGATCAGGCAACTCGTGAGCGTAGTCTTGAGATTATGCAGAAGGCACTTGATCTTGCGGGTGACTT
GGGACTTCACACCATTCAGCTTGCTGGCTATGATGTGTACTACGAGGACGGTGCAGAGGATACGCGCAAGTATTTTGAGG
AGAACCTGGCTAAGGCTGTAGAAATGGCTGCTAAGGCGGGTATTGTTATGGGCTTTGAGACCATGGAAACTCCTTTTATG
GATACGGTCGAGAAGGCCATGCACTACGTAAACCTTATCAAGAGCCCTTACCTTGGTGTTTATCCCGACGCTGGCAATCT
TACCAATGCATCGTTTATTTACGGCAATACTGTTGCTGATGATATTGCTCTTGGTGCAGGTCATATCTTGGCAGCTCACC
TAAAAGAGACTGTTGCTGGCGCTTATCGTGAGATTCCATTCTCTACGGGTACCACTGACTATGAGGGCGCTCTGTCACAG
CTTGTTCCTCAGGGTGTTAGACGTTTTGTTGCAGAGATGTGGTACACCGGAAACGAGAACTGGAAAGAAGATCTTGTCTT
TGCTTCCACATACGTTCGCAGCAAAATTGATAAGGTGTTTGAAGGGTAA

Protein sequence :
MSKYQLGLYEKATPTDLSWEERLSIAGESGFDYVEISVDESDARLSRLEWSGEERAAVCQAMVNSGVRLGSMCLSGHRKY
PFGSRDQATRERSLEIMQKALDLAGDLGLHTIQLAGYDVYYEDGAEDTRKYFEENLAKAVEMAAKAGIVMGFETMETPFM
DTVEKAMHYVNLIKSPYLGVYPDAGNLTNASFIYGNTVADDIALGAGHILAAHLKETVAGAYREIPFSTGTTDYEGALSQ
LVPQGVRRFVAEMWYTGNENWKEDLVFASTYVRSKIDKVFEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 9e-46 42