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Name : araD (Apar_0330) Accession : YP_003179352.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 378258 - 378959 bp Length : 702 bp Strand : + Note : catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate in the L-arabinose and L-ascorbate degradation pathways DNA sequence : ATGATGCTTAAAGAGCTTCGTGATGAAGTATATGAAGCAAATATGGATCTGCCAAAGCATGGCCTGGTAGTTTTTACCTG GGGTAATGCTTCTGGACTTGATCGTGAACGTGGTCTGTTTGTTATCAAGCCATCGGGTGTTTCTTATGAGGAGCTCAGCC CGGAGAACTTGGTTGTCTGTGATCTTGATGGCAATGTTGTTGAGGGTGAGTTGAACCCATCTTCCGATACTCCAACTCAT GCTTGTTTGTATCGTGCATGGGGCGATAAGATCGGCGGAATTGTTCACACTCACTCAACCCACGCTGTTTCTTGGGCACA GGCTGGACGCTCTATTCCTTGCTATGGCACCACACACGCAGATTATTTCTATGGAGATATTCCTTGCGTGCGCAGCCTAA CTAAGGGCGAGGTAGAGAGTGCATATGAGCTTGAGACCGGAAACGTTATTGTTGAGGGCTTTGCTAACTTGGATCCAATT GCGGTTCCTGGAACGCTCCTTCACAACCACGGTCCTTTCTCTTGGGGTAAAGATGCCATGGCTGCTGTGTACCACGCTGT AGTCATCGAGGAGGTTGCTAAGATGGCAACACTCACCGAGCTCAATAACCCTAAAGTTCAGGAGGCACCACAGTACCTTC AGGACAAGCACTACATGCGCAAGCATGGTCCAAATGCCTACTACGGACAGGGTAATCATTAA Protein sequence : MMLKELRDEVYEANMDLPKHGLVVFTWGNASGLDRERGLFVIKPSGVSYEELSPENLVVCDLDGNVVEGELNPSSDTPTH ACLYRAWGDKIGGIVHTHSTHAVSWAQAGRSIPCYGTTHADYFYGDIPCVRSLTKGEVESAYELETGNVIVEGFANLDPI AVPGTLLHNHGPFSWGKDAMAAVYHAVVIEEVAKMATLTELNNPKVQEAPQYLQDKHYMRKHGPNAYYGQGNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 7e-73 | 69 |
