|
Name : Apar_1338 (Apar_1338) Accession : YP_003180353.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1505583 - 1506866 bp Length : 1284 bp Strand : - Note : KEGG: dal:Dalk_4396 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like DNA sequence : ATGCTTGATATCAAATTTGTGCGCGAGAATCCTGACCTCGTAGATAAGGCTTGCGAGTCTAGGCAAAACGCCCATTGGGA TCGCGAGAAGTTCTTTGAGCTTGATGAGGAACGTAGAAGCGTAATTAGTGAGGTAGAGACGCTTCAGGCAGAGCGCAATG CTGTTTCTAAGCAGATTGGCCTTCTTATGCGTGAGGGCAAGAAGGAAGAGGCTGAGGCAGCTAAGGAGCAGGTAGCAGCT AACAAAGATCACATTGCTAGGCTTGACCAGCGTCGCGGTGAGGTTGAGGAGGAGCTCACAGCCCTTGTTGCAGCTATTCC AAACATTCCTGACGCATCTGTTCCTTATGGCAAAGACGACTCTGATAATCCAGAGGTTCGCAAGTGGGGAGAGCCAACTC AGTTTGACTTTGAGCCAAAAGCACACTGGGACCTTGGTCCTGAACTGGGCATGATTGACTTTGATCGTGGTGTAAAACTT GCAGGAACTCGTTTCTACCTTCTTGGTGGTATGGGCGCTCGTATGGAACGTGCGCTTATTAACTTCATGATTGATACGCA TAATCAGGCAGGCTTCAAAGAGTGGTGGCCACCAGTCATTACTAACCAGGATTCACTCTATGGCACTGGTCAGCTTCCAA AGTTTGAGGAAGATTTGTATCACGTTCAGCCTGACCTTTACCTCATTCCAACTGCTGAGGTTCAGCTCACTAACATTCAC CGTGATGAAATTCTGGATGCATCTCAGCTTCCTTTGCTCTATACCGCGTTCACTCCATGTTTCCGCGAGGAGGCAGGTTC AGCTGGTCGAGACACTCGTGGTATCATCCGCGTTCACCAGTTTGACAAGGTAGAGATGGTTAAGTTTGCAAAGCCTGAGG ATTCCATGAATCAACTTGAGTCTATGGTTCAGGAAGCCGAGAAGATCCTTCAGCTTCTGGGTCTTCCTTATCATGTGGTT ACTCTCTGCACTGGCGACATTGGATTCTCTGCATGTAAGTGCTATGACATCGAAGTCTGGCTCCCAAGCTATAACGCATA CAAGGAGATTTCTTCTTGCTCAAACTGCTGGGATTTCCAGGCACGTCGTGCAAATATTCGCTATAAGGATCCAGCCGAAT TTAAGGGCACCCGCTTAGTTCATACACTTAATGGCTCGGGCCTGGCGGTTGGTCGTACTATGGCAGCAATTATGGAGAAT TATCAGAACGCGGATGGCTCCGTTACTGTTCCTGAGGTGCTTCGCCCTTACATGGGTGGCATTGAGGTTATTCGTCCAGA ATAG Protein sequence : MLDIKFVRENPDLVDKACESRQNAHWDREKFFELDEERRSVISEVETLQAERNAVSKQIGLLMREGKKEEAEAAKEQVAA NKDHIARLDQRRGEVEEELTALVAAIPNIPDASVPYGKDDSDNPEVRKWGEPTQFDFEPKAHWDLGPELGMIDFDRGVKL AGTRFYLLGGMGARMERALINFMIDTHNQAGFKEWWPPVITNQDSLYGTGQLPKFEEDLYHVQPDLYLIPTAEVQLTNIH RDEILDASQLPLLYTAFTPCFREEAGSAGRDTRGIIRVHQFDKVEMVKFAKPEDSMNQLESMVQEAEKILQLLGLPYHVV TLCTGDIGFSACKCYDIEVWLPSYNAYKEISSCSNCWDFQARRANIRYKDPAEFKGTRLVHTLNGSGLAVGRTMAAIMEN YQNADGSVTVPEVLRPYMGGIEVIRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-104 | 57 |
