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Name : Apar_1272 (Apar_1272) Accession : YP_003180287.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1428383 - 1428868 bp Length : 486 bp Strand : - Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: ppd:Ppro_1314 SsrA-binding protein DNA sequence : ATGGCCGAAAACCAGGTGAAACAACAAGGCAAGAAGTCGATTGCGCGCAATCGCTCTGCTCGCCATGAGTACGAGATTGG CGAGACCTTTGAGTGCGGTCTGGTGCTTACTGGTACCGAGGTCAAGAGTTTGCGTGAGCGTGGTTGCCAGTTAACCGATA CGTTTTGTCTCATTCGTGACGGTGAGGCATGGATTCACGGTATGCATTTACACCCGTACACAAATGGCGGCGTATGGAAC GTTGATCCAGATAGAAAGCGTAAACTGCTGCTTCACCGCAGGCAGATTGATTATCTTGATGGAAAGCTACGCCAGAAAGG TCTGGCACTGGTTCCGCTTGAAATCTATTTTGACGAGCATAACCGCGTTAAGCTGTTGATTGCGCTTTCACAGGGTAAAA AACTCTACGACAAGCGTGCGTCTGCAGCTAAACGTGATTCTGACCGCGAGATTCAACGAGCCCTTAAGGAGCGTAGTCGC TACTAG Protein sequence : MAENQVKQQGKKSIARNRSARHEYEIGETFECGLVLTGTEVKSLRERGCQLTDTFCLIRDGEAWIHGMHLHPYTNGGVWN VDPDRKRKLLLHRRQIDYLDGKLRQKGLALVPLEIYFDEHNRVKLLIALSQGKKLYDKRASAAKRDSDREIQRALKERSR Y |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 3e-32 | 48 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 4e-27 | 43 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-22 | 41 |
