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Name : Apar_1187 (Apar_1187) Accession : YP_003180206.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1330477 - 1332078 bp Length : 1602 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: pca:Pcar_1248 lysyl-tRNA synthetase DNA sequence : ATGTCCGAAGTAGAAAACAACATTGCTGGTAACTCGGCCGCTGCTGAGAACACTGCTGCAAAGAACAACACAGCTGTCAT AACTGCCGCCGACGCAACTGAAGCCACCCCAGAAGCTTCCATTAACGACGAGCGTGCTCAGCGCAAGGCCCGTCGCCAGG CGCTGCTTGACGCTGGCATTGACCCATATCCAATCCAGTCCACTGTCACCGCTCACGTTGCTGAGCTGGAGGAGCGCTAC GCTGACCTCGAGGACGGCCAGACTGGCGAGGAAGTTTATTCTGTCGCTGGCCGAGTCCGTGCCATTCGCAACCAGGGCAA GATCGCGTTTGTCGTGGTAGAGGACTATACCGGTCAGATTCAACTCTTCTGCCGCATCAATAACCTTGACGAGAAAAACT GGGAGCTTCTGGGTCTTCTCGACCTTGGCGACATCATCGGCGCAACCGGTGCTATTATGCGTACGCGCCGCGGCCAGCTT TCTTTGGCAGTGACCTCGCTGGAGGTTCTCTCCAAGTCGCTGCGTCCTCTTCCAGAGAAATTCCACGGCCTCACTGATCG CGAGGTTCGTTATCGCCAGCGCTACGTTGACCTCATCATGAATCCTGAGGTCCGCGACGTATTTCGCAAGCGCTCTCAGA TTATCTCCATCATCCGCCAGTTCATGGAGGCGGACGGCTATATGGAGGTTGAGACTCCTGTTCTCCAGGAGATTCTTGGC GGCGCAAACGCAAAGCCGTTCATCACACATTACAATGCTCTAAACACCGAGGACTACCTGCGCATTGCAACCGAGCTCCC GCTGAAACGCCTGCTTGTTGGTGGTCTTGAGCGCGTCTATGAGCTTGGTCGTCAGTTCAGGAACGAGGGCACCGACCTCA CGCACAATCCAGAGTTCACTTCCATGGAGGCATATGCTGCCTACTCTGACCTGGCCGGCATGCGCGAGCTCTCCCAGAAC CTCTTCCAAGAGATTGCTCGCAAGACCTGCGGTTGTGAGGAAGGCCACGAGGTCATCACCTACCAGGGTACCGAGGTTGA TCTCTCCGGCAACTGGCGCGTCGCATCTCTGGCAGAGATTGCATCCGAGGTCACCGGCGAGGAGCTCTCCATTGACACTC CTGTCGAGAAACTCCGTGCAGTCCTGGATCGCTACGAGATTGAGTGGAACCCAGAGTGGCAGGCTGGCAAGCTGCTCTTT GAGATTTACGACGAGCTTGGCGAGAAAAGCATCGTAAACCCAACCTTTGTCTGTGATTATCCTGCAGAGGTTTCTCCGCT TACTAAACGCAAGGCAGACGATCCTCGCCTGACCGATCGCTTTGAGCTTATTATCTGTGGCGCAGAGTACGCAAACGCAT ATTCCGAGCTCAATGACCCTGTTGATCAGGAGGAGCGCTTTGCTGCTCAGATGGAGGCTAAACGTCAGGGCGACGAAGAG GCCATGGAGTACGATTACGACTTCATTCGCGCACTTGAGTATGGTATGCCACCAGCGGGCGGCATCGGCTACGGCATCGA CCGCATGATGATGCTCTTCTGCGATCAGCCTTCTATCCGCGATGTCCTTCTCTTCCCACAGCTCAAGCCCGAGAAACGCT AA Protein sequence : MSEVENNIAGNSAAAENTAAKNNTAVITAADATEATPEASINDERAQRKARRQALLDAGIDPYPIQSTVTAHVAELEERY ADLEDGQTGEEVYSVAGRVRAIRNQGKIAFVVVEDYTGQIQLFCRINNLDEKNWELLGLLDLGDIIGATGAIMRTRRGQL SLAVTSLEVLSKSLRPLPEKFHGLTDREVRYRQRYVDLIMNPEVRDVFRKRSQIISIIRQFMEADGYMEVETPVLQEILG GANAKPFITHYNALNTEDYLRIATELPLKRLLVGGLERVYELGRQFRNEGTDLTHNPEFTSMEAYAAYSDLAGMRELSQN LFQEIARKTCGCEEGHEVITYQGTEVDLSGNWRVASLAEIASEVTGEELSIDTPVEKLRAVLDRYEIEWNPEWQAGKLLF EIYDELGEKSIVNPTFVCDYPAEVSPLTKRKADDPRLTDRFELIICGAEYANAYSELNDPVDQEERFAAQMEAKRQGDEE AMEYDYDFIRALEYGMPPAGGIGYGIDRMMMLFCDQPSIRDVLLFPQLKPEKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-88 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Apar_1187 | YP_003180206.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-88 | 44 |
