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Name : Apar_1175 (Apar_1175) Accession : YP_003180194.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 1316360 - 1316905 bp Length : 546 bp Strand : - Note : KEGG: bsu:BSU01010 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; SMART: NGN domain protein DNA sequence : ATGGCTAAGCGCTGGTATGTAGTTCACACCTATTCAGGTTATGAAAACAAGGTAAAAACTGACCTTGAGCACCGTATTGA GACCTATGGTCTTGAGCGTGCTGTTGTTGATATTCAGATTCCTACTGAGGAAGTTACTGAAGTCAAGGACGGCGGTAAGC GCGAGACCAAAGAATCTAAGGTTTTCCCAGGCTATGTTCTTGTTCGCATGGAGCTGGATGACAATACGTGGGCTGTTGTT CGCAACACACCAGGTGTAACTGGTTTTGTTGGCATCGACGGTAAGCCAGTTCCTCTGCGTCGCGATGAGTTTGATAAGAT TATGCGTCGTGGCGGCATGAAGACAGGTAGCCCTGTACCTAAGCGTACAGCAACCAATATTGAGGTCGGTCAGGCAATTC ATGTTCTTTCAGGTCCTCTTGCTGACTTTGATGGCACTGTTTCTGAGGTCAATGCAGAGTCCGGCAAGATTAAGGTTATG CTCACCATCTTTGGTCGTGAGACTCCGGTTGAGCTTACCATGGACCAGATTTCCTTGATAGACTAG Protein sequence : MAKRWYVVHTYSGYENKVKTDLEHRIETYGLERAVVDIQIPTEEVTEVKDGGKRETKESKVFPGYVLVRMELDDNTWAVV RNTPGVTGFVGIDGKPVPLRRDEFDKIMRRGGMKTGSPVPKRTATNIEVGQAIHVLSGPLADFDGTVSEVNAESGKIKVM LTIFGRETPVELTMDQISLID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 9e-33 | 43 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 9e-33 | 43 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 3e-29 | 42 |
