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Name : Apar_0100 (Apar_0100) Accession : YP_003179127.1 Strain : Atopobium parvulum DSM 20469 Genome accession: NC_013203 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 108428 - 111010 bp Length : 2583 bp Strand : + Note : KEGG: ank:AnaeK_0413 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AA DNA sequence : ATGAGACTAGATAAATGGGCTGTAACCGCCCAGGAAGCACTGCAGGCAGCTCTTGGTATTGCTGGCGACGCAGAGGCTTC TGAGGTTACACCAACGCACCTGCTCAAGGCGTTGTTGGACAGCAACGAGCGCAACCTGCGTTCTATTTTGGAGAAGATTG GCGCAGATCCTGACAGCATTGCTACGCAGGTAGACCAGGCAATCTCCAAGGCTCCAAAGGTAAGTGGAGCACAGATTGGC ATTGGCAACGACCTTCTCAAGGTTATTAACGAGGCCGAGAAGCTTGCCACCAAGCTGGGAGATTCTTACGTTACCTCTGA GCATTTGCTCACAGCGTTAGCAAACGATAACACTGACGCAGGTAGGATTCTTCGCGACGCCGGCATTACAGCCAAGCGTG TAGAAGAGGTGTACAACGATCTTCGCGGTGATGAGCGTGTAACCTCGCAGGATGCAAAGCCACAGTTTGAGGCGTTGGAG CAGTATGGTCGCAATGTGACCGATCTTGCTCGTCAGGGAAAGCTTGATCCAGTTATTGGCCGCGTCGAAGAAATTCGTCG CACCATTCAGGTTCTGAGCCGCCGCACCAAGAACAATCCTGTTCTCATTGGCGAGCCTGGTGTTGGTAAGACCGCAATCG TGGAAGGCCTGGCAGAACGCATTGTTTCTGGCGACGTTCCAAGTACCCTGCGCGATAAAGAGCTTGTTGAGCTTGACATG TCTGCCCTGGTAGCGGGTGCAAAGTACCGTGGTGAGTTTGAGGACCGCCTGAAGAGCGTGGTAAAAGAGGTGGCCAAGTC TAACGGCCAGATTATTCTCTTCATTGACGAGCTCCACACCATCGTAGGCGCTGGTGCTTCCGAGGGCTCCATGGACGCTG GCAACATCTTGAAGCCAGCACTTGCCCGTGGAGAGCTCCGTGCAATTGGTGCCACTACGCTGGATGAATACCGCAAGTAC ATCGAGAAGGACGCTGCTCTTGCACGTCGTTTCCAGACCGTACTTGTCTCTGAGCCTACTGTTGAAGATACCATTTCTAT CTTGCGTGGCCTTAAGGAGAAGTACGAGCAGCACCACCGCGTCCGTATTACGGACTCCGCTTTGGTTGCAGCAGCAGACC TTTCTAACCGCTACATTTCTGACCGATTCTTGCCAGATAAGGCGATTGACTTGGTAGATGAGGCAGCGTCAAGACTTCGC ATGGAGCTTGATTCTATGCCAGCAGAGATTGATGCGGTTGATCGTCAGCTTACTCAGATGCAGATTGAGGAGCAGGCTCT GATGAAGGAGGAGGACGCTGCTTCCAAGGAGCGCCTGGAGAACCTTCGCGCAGAGATTGCTACGACGCAGGAGAAGCTGG ATGGCATGAAGGCCAACTGGCAGAACGAGCGCGGCGCAATTGACCTGGTACAGGACTTGAAATCCCAGATTGAGGAAGCA AAGACGCAGATGGAGCGTGTGACTCGCGAGGGTAATTTAGCGCAGGCATCTGAGCTTCGTTACAGCACTATTCCAGAGCT TGAACGTAAATACGATGAGGCAGAAAAGGCCCTTCTCGCCAAGCAGGAAGACGGCGGAATCCTCAAGGAAGAGGTCACCA CGGACGAGATTGCCGAGGTAGTTTCTTCGTGGACCGGCGTGCCTGTGTCCAAGATGATGCAGGGCGAGATGGACAAGCTC AAGAACCTTGAGGACCAGCTTCACCTGCGCGTTATTGGTCAGGACGATGCTGTTTCCGCAGTTGCTGCAGCGGTCCGTCG TTCTCGCGCGGGTCTGGCAGATCCAAACAAGCCTCTGGGCAGCTTCTTCTTCCTGGGCCCAACCGGTGTGGGCAAGACCG AGCTGGCAAAGGCGCTGGCAGAGCTGCTGTTTGACGACGAGCGCTCGCTGATCCGCATTGATATGTCTGAGTACATGGAG AAGTTCTCGGTCCAGCGACTCATTGGCGCACCTCCAGGATACGTGGGTTATGACGAGGGTGGCCAGCTCACCGAGGCAGT TCGTAGGCATCCATACTCCGTCATCTTGCTGGACGAGATGGAGAAGGCCCATCCTGATGTCTTCAACATCTTGCTGCAGG TACTGGACGATGGTCGACTAACGGACGGTCAAGGTAGGGTAGTCAGCTTCAAGAACACCATCATTATCATGACCAGTAAT GTTGGTTCGCAGTTCATTGCCGGTGCTGGCGAAGAGGGTCTTACTGAAGAGTCCAGAAAGCAAGTTATGGAGGCGCTACG TAGCTCCTTCCGCCCTGAGTTCTTGAACCGTATCGACGACGTGGTTGTCTTCCAGCCTTTGGGTCTTGAAGATATTGAGC GCATCGTTGATATTCAGCTCAAGGATGTTCGTAGTAGACTTGCTAACGAGCGCATGACGCTGGAGCTTTCTGAGGCTGCA AAGCAGTCACTGGCTCTTGATGGTCTGGATCCTGTTTATGGTGCTCGTCCTTTGAAGCGACTGATTCAGCGTCGCGTTGT TGACCAGGTAGCAAACTTGATTATTGCAGGTGAGCTGTCTGAGGGCGATACTGTTCTGATTGATACTGACGAGAACGGCA ATTTGGTTGCTCGTAAGAAGTAA Protein sequence : MRLDKWAVTAQEALQAALGIAGDAEASEVTPTHLLKALLDSNERNLRSILEKIGADPDSIATQVDQAISKAPKVSGAQIG IGNDLLKVINEAEKLATKLGDSYVTSEHLLTALANDNTDAGRILRDAGITAKRVEEVYNDLRGDERVTSQDAKPQFEALE QYGRNVTDLARQGKLDPVIGRVEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAERIVSGDVPSTLRDKELVELDM SALVAGAKYRGEFEDRLKSVVKEVAKSNGQIILFIDELHTIVGAGASEGSMDAGNILKPALARGELRAIGATTLDEYRKY IEKDAALARRFQTVLVSEPTVEDTISILRGLKEKYEQHHRVRITDSALVAAADLSNRYISDRFLPDKAIDLVDEAASRLR MELDSMPAEIDAVDRQLTQMQIEEQALMKEEDAASKERLENLRAEIATTQEKLDGMKANWQNERGAIDLVQDLKSQIEEA KTQMERVTREGNLAQASELRYSTIPELERKYDEAEKALLAKQEDGGILKEEVTTDEIAEVVSSWTGVPVSKMMQGEMDKL KNLEDQLHLRVIGQDDAVSAVAAAVRRSRAGLADPNKPLGSFFFLGPTGVGKTELAKALAELLFDDERSLIRIDMSEYME KFSVQRLIGAPPGYVGYDEGGQLTEAVRRHPYSVILLDEMEKAHPDVFNILLQVLDDGRLTDGQGRVVSFKNTIIIMTSN VGSQFIAGAGEEGLTEESRKQVMEALRSSFRPEFLNRIDDVVVFQPLGLEDIERIVDIQLKDVRSRLANERMTLELSEAA KQSLALDGLDPVYGARPLKRLIQRRVVDQVANLIIAGELSEGDTVLIDTDENGNLVARKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-107 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Apar_0100 | YP_003179127.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 6e-117 | 45 |
| Apar_0100 | YP_003179127.1 | ATP-dependent chaperone ClpB | VFG0079 | Protein | 2e-138 | 43 |
| Apar_0100 | YP_003179127.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 6e-110 | 43 |
