|
Name : Hmuk_0051 (Hmuk_0051) Accession : YP_003175909.1 Strain : Halomicrobium mukohataei DSM 12286 Genome accession: NC_013202 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 48422 - 50194 bp Length : 1773 bp Strand : + Note : PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: hma:rrnAC0224 alpha-glucosidase DNA sequence : GTGAGCGAGACAGTCGAGCGGACGCGATCCGACCGCCAGTGGTGGGAAGAGGCCGTCGTCTACCAGATCTACCCGAAGAG TTTCTTCGACAGCGACGGCGACGGGATCGGTGACCTCGCGGGCATCACCGAGAAGGTCGACTACCTCGACGCGCTCGGGG TCGACGCGGTCTGGCTCTGTCCCGTCTACGACTCGCCACAGGCCGACAACGGCTACGACATCCGCGACTACCGGTCGATC TTCGACACCTACGGCGACATGGCCGACTGGGAGCGCCTGCTGGCCGAACTCCACGACCGAAATATTCGGCTGGTCATGGA CCTCGTCGTCAACCATACATCGGCCGAACACGAGTGGTTCCAGCACTCGCGCCGTGGCGAGAGCGAGTACGCCGACTACT ACCACTGGCGCGACGGCCGCCCGGCTGAGACGGCCGACTACGACACCGACGACGGTCCCGCCGACGAGGTCGCCCCCAAC AACTGGGACTCGATCTTCGGCGGCCCGGCGTGGGCCTACGACGAGGAGCGCGGACAGTGGTACCTCCACCTCTTCGACGA GAGCCAGCCGGACCTCAACTGGGAGAACGAGGCCGTCCGCGAGGACGTGTACGAGATGATGCGCTGGTGGCTCGACCGCG GGATCGACGGCTTCCGCATGGACGTAATCAACCTCGTCTCGAAGACGCCGGGGCTCCCCGACGGCGACCCGGAGAGTGGG CTCGTCGGTGCAGAGCACTTCATGAACGGGCCCAAAGTCCACGATTACCTCTCGGAGCTGGTCGCCGAAGCCATCCCGGA CGACGAGATCCTCACCGTCGGCGAGACGCCGGGAGCGGGCGTCGAGGACGCCCAGCGGTTCGTCGGCGAGGACGGCCTCT CGATGGTGTTCCAGTTCGAACACGTCAACGTCGGCCACGAGGGCGACAAGTGGTCGCTGGAGGACTACTCGCTGGTCGAA CTCAAAGAGAGTCTCGCACGCTGGCAGAACGGTCTGGCCGACGAGGGGTGGAACAGCCTCTACCTGAGCAACCACGACCA GCCACGGACCGTCTCCCGGTTCGGCGACGACGGGCGGTACCGTCGCCGCTCCGCGAAGCTGTTCGGGACGCTGCTGTACA CCCTCCAGGGAACGCCGTTCGTCTACCAGGGCCAGGAGATCGGCATGACCAACGCCCCCTTCGAGTCGAAGTCAGAGCTG CGGGACGTGGAGTCGATCAACTTCGTCGAGGAAGCCATCGAGAGCGGCGCGGCCGAGAGCTACGAGGACGTACGCGACGC CGTCGAGACCGTCGGCCGCGACAACGCCCGGACGCCGATGCAGTGGTCCGACGACGAGAACGCCGGCTTCACCGACGGCG AGCCCTGGCTCAAGGTCAACCCCAACTACGACGCGATCAACGTCGAGCGGGCACGCGCCGACCCCGATTCGGTGTGGCAC TACTACCGCGAACTCGGCGATCTTCGGGGGAATCGGGACCTGCTGGTCTACGGCGACTTCGAGCTGCTCGCGCCCGGGGA CGAGCAGGTGTTCGCCTACACCCGGACGCTGGGCGACGAACGGGCCCTCGTTGTCCTCAACGTCTCCGCCGAGCCCGCGA CGTTCGCGGTGCCCGACGACGCTGGCGACGACCTCGAACTCGCCATTGGGAACCTGAACGCCCTCGAAACGCCCGGCAGC ACCGTCGAACTCGATCCCTACGAGGCGCGCGTCTATCTGACGCCCGCGACCGACACTGACCGACCGACGACCACGAACTC CGATTCGACATGA Protein sequence : MSETVERTRSDRQWWEEAVVYQIYPKSFFDSDGDGIGDLAGITEKVDYLDALGVDAVWLCPVYDSPQADNGYDIRDYRSI FDTYGDMADWERLLAELHDRNIRLVMDLVVNHTSAEHEWFQHSRRGESEYADYYHWRDGRPAETADYDTDDGPADEVAPN NWDSIFGGPAWAYDEERGQWYLHLFDESQPDLNWENEAVREDVYEMMRWWLDRGIDGFRMDVINLVSKTPGLPDGDPESG LVGAEHFMNGPKVHDYLSELVAEAIPDDEILTVGETPGAGVEDAQRFVGEDGLSMVFQFEHVNVGHEGDKWSLEDYSLVE LKESLARWQNGLADEGWNSLYLSNHDQPRTVSRFGDDGRYRRRSAKLFGTLLYTLQGTPFVYQGQEIGMTNAPFESKSEL RDVESINFVEEAIESGAAESYEDVRDAVETVGRDNARTPMQWSDDENAGFTDGEPWLKVNPNYDAINVERARADPDSVWH YYRELGDLRGNRDLLVYGDFELLAPGDEQVFAYTRTLGDERALVVLNVSAEPATFAVPDDAGDDLELAIGNLNALETPGS TVELDPYEARVYLTPATDTDRPTTTNSDST |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-122 | 47 |
