Gene Information

Name : Hmuk_2442 (Hmuk_2442)
Accession : YP_003178258.1
Strain : Halomicrobium mukohataei DSM 12286
Genome accession: NC_013202
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2343540 - 2344490 bp
Length : 951 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hma:pNG7276 ferrichrome ABC transporter ATP- binding protein

DNA sequence : 
ATGGCACGCAACACTACCGAGACACGGCAGCGGAACGGCAGCGAGGAAGCGCTCTCGAACGAGTCGGCCGCCGACGCTAT
CGGCTCGAAGCAGGCGAGCGAGCTCTCGGGAGAGGATCTCGTCCTCAGATACCCCTCGATGGACGAGCCAGTGATCGACG
GCGAGCGGCTCGTCGCGACGCCGGGAGCGGTCACCGCCTTAGTCGGGCCGAACGGCTCCGGCAAGAGCACGCTGTTGAAG
GGGCTCGCCAAGCAGCTCACGCCCGACGAGGGGACGGTACTTTTGGACGGCCGCGACGTTCACTCGATGGGAACGAAGGA
GCTGGCTCGCAAGCTCGGGCTGCTCTCCCAGGAGAGCACGTCGCCGGAGTCGATCACGGTTGAGGACCTCGTCTACCACG
GCCGATATCCCCACCGGGGATTCTTCGAGACTACCACCGAGGAGGACAACCGCGCGGTCGACCGGGCGATCGACCTCGCC
GGCTGCGGACACCTCCGTGACCGCGAGGTCGGGAGCCTCTCGGGCGGGCAGAAACAGCTCGCGTGGATCGCGATGGTGCT
CGCACAGGACACCGACGTGTTACTGCTCGACGAACCAACGACGTTCCTCGACCTTCATCACCAACTCGAAGTGATGGAAA
TCGTCGAGACGCTGCGTGACGAGAGCGACATCACGGTCGTGGTCGTCCTCCACGACATCGAGCAGGCGGCCCGGCTCGCC
GACGAGATGGTCGCACTCAAGGACGGCGCGATCCGGGCGCGCGGGACCCCCGAAGAGGTCGTCACCGAGGAGTTGCTCGC
GGACGTGTTCGAGATCGACGCCGAAGTCGATGTCATCGAGCGCGGGCCGCGGGTCACGCCGCTTCGGGCGCGGCACGACG
ATGTCGACCGAGCAGGCGGCGACGCCGAAGAGGCCGAGGGCTCTCCGCCGGAGGTACTCGAAGCCGAGTGA

Protein sequence : 
MARNTTETRQRNGSEEALSNESAADAIGSKQASELSGEDLVLRYPSMDEPVIDGERLVATPGAVTALVGPNGSGKSTLLK
GLAKQLTPDEGTVLLDGRDVHSMGTKELARKLGLLSQESTSPESITVEDLVYHGRYPHRGFFETTTEEDNRAVDRAIDLA
GCGHLRDREVGSLSGGQKQLAWIAMVLAQDTDVLLLDEPTTFLDLHHQLEVMEIVETLRDESDITVVVVLHDIEQAARLA
DEMVALKDGAIRARGTPEEVVTEELLADVFEIDAEVDVIERGPRVTPLRARHDDVDRAGGDAEEAEGSPPEVLEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-47 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-47 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-52 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-52 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-52 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-52 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-44 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-44 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-43 41
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hmuk_2442 YP_003178258.1 ABC transporter BAC0164 Protein 5e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hmuk_2442 YP_003178258.1 ABC transporter VFG1042 Protein 4e-47 45
Hmuk_2442 YP_003178258.1 ABC transporter VFG0925 Protein 3e-52 45