Gene Information

Name : Hmuk_1649 (Hmuk_1649)
Accession : YP_003177470.1
Strain : Halomicrobium mukohataei DSM 12286
Genome accession: NC_013202
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1572528 - 1573433 bp
Length : 906 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGTCCGATACCGATCTCGAAGAGCTCAAGCGGGGGACGGAACTGGTCAAGCGCGGCTTCGCGAAGATGCAGAAGGGCGG
CGTCATCATGGACGTCGTCGACCGCGAGCAGGCCCGCATCGCGGAGGACGTGGGTGCCGTCGCCGTGATGAACCTCGAAG
CCGTGCCGGCGGACATCCGCAAGCGCGGTGGCGTCTCCCGGATGGCCGACCCCGCCTCGCTGCAGGCGATCATCGACGAG
GTGTCGATCCCGGTGATGGGCAAGTCCCGGATCGGACACACCAAGGAGGCCCAGATCCTCGAGGCCGCCGGTGCGGACAT
GGTCGACGAGAGCGAGGTGCTCACGCCGGCCGACGACCGCTATCACATCGACAAGCGCGAGTTCACCGCCCCGTTCGTCT
GTGGCGCGCGGAACCTCGGCGAGGCGCTGCGCCGGATCGACGAGGGCGCGGCGATGATTCGAACCAAAGGCGAGGCCGGC
ACCGGCGACGTGAACCAGGCCGTCCACCACCAGCGGTCGATTAAGGGCGCGATCCGACAGCTTGACGGGATGAGCTACGA
GGAACGCGAGAAGTGGGCCCGCGAGCACGAGGCCCCGGCCGATCTCGTCCACGAGACCGCCGAGATGGGACGCCTCCCGG
TCGTCAACTTCGCCGCCGGTGGCATCGCGACTCCCGCCGACGCCGCGCTGATGATGCACCACGGCTGTGACGGCATCTTC
GTCGGCTCGGGCATCTTCGGCGCAGAGGACCCCGAAGCGATGGGCACCGCCATCGTCGAGGCGGTCAACAACTGGGACGA
CCCCGAGCGACTCGCCGAGATCGCGTCGGACATCGGCGGCGGCATGAAGGGCGACGCCAACGCCGACCTGCCCGAAGAAG
AGAAGATGCAGGGCCGTGGCGTCTGA

Protein sequence :
MSDTDLEELKRGTELVKRGFAKMQKGGVIMDVVDREQARIAEDVGAVAVMNLEAVPADIRKRGGVSRMADPASLQAIIDE
VSIPVMGKSRIGHTKEAQILEAAGADMVDESEVLTPADDRYHIDKREFTAPFVCGARNLGEALRRIDEGAAMIRTKGEAG
TGDVNQAVHHQRSIKGAIRQLDGMSYEEREKWAREHEAPADLVHETAEMGRLPVVNFAAGGIATPADAALMMHHGCDGIF
VGSGIFGAEDPEAMGTAIVEAVNNWDDPERLAEIASDIGGGMKGDANADLPEEEKMQGRGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-69 60
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-69 60
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-69 60