Gene Information

Name : Hmuk_1518 (Hmuk_1518)
Accession : YP_003177340.1
Strain : Halomicrobium mukohataei DSM 12286
Genome accession: NC_013202
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1444676 - 1445344 bp
Length : 669 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: nph:NP0100A macrolides/lipoproteins ABC transporter ATP-binding protein

DNA sequence : 
ATGAGCGTCATCAGCGCCACCGACGCGGTGAAGATCTACGAGTCCGGCGACAAGACGCTGCGTGCGCTCGACGGCGTCTC
CGTCGACGTGAACGCCGGTGAGTTCGCGTCCGTCGTCGGCCCCAGCGGGAGCGGGAAGTCGACCCTGCTGAACCTGCTGG
GCCTGCTCGACGAGCCCTCCGAGGGCAGCGTCACCGTCGACGGGACGGCACTGTCGACGCTCTCGAAGCGCGAACGGACG
GACCTCAGACGCGAGACCGTCGGATTCATCTTCCAGAGCTTCTACCTGGTGCCGACGCTGACCGCGCGCCAGAACGTCGC
CGTCCCCGGACTCGTCCGCGACGATCGGTCGGATCTGCAGGCGCGGGCCGACGAACTGCTCGAACGCGTCGGGCTGGGCG
ACCGACTCGACCACTACCCAAACGAGCTGTCCGGCGGGCAGAAACAGCGCGTGGCCGTCGCGCGGTCGCTGATCAACGAT
CCCGACATCCTGCTGGCCGACGAGCCCACGGGGAACCTCGACCAGGACACCGGCGCGCAGGTACTGGACGTGTTCGGCGA
GATCACCGACGAGGGCGTCGCGATCCTCACCGTCACCCACGACGAGCAGGTGACCGACTTCGCCGACCGGACGATCAGGC
TCGTCGACGGGAGGTTAGACGATGATTGA

Protein sequence : 
MSVISATDAVKIYESGDKTLRALDGVSVDVNAGEFASVVGPSGSGKSTLLNLLGLLDEPSEGSVTVDGTALSTLSKRERT
DLRRETVGFIFQSFYLVPTLTARQNVAVPGLVRDDRSDLQARADELLERVGLGDRLDHYPNELSGGQKQRVAVARSLIND
PDILLADEPTGNLDQDTGAQVLDVFGEITDEGVAILTVTHDEQVTDFADRTIRLVDGRLDDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hmuk_1518 YP_003177340.1 ABC transporter NC_008702.1.4606598. Protein 9e-36 47
Hmuk_1518 YP_003177340.1 ABC transporter CP001581.1.gene598.p Protein 3e-33 44
Hmuk_1518 YP_003177340.1 ABC transporter NC_012469.1.7686878. Protein 5e-39 43
Hmuk_1518 YP_003177340.1 ABC transporter CP001581.1.gene798.p Protein 8e-30 42