|
Name : secA (LC705_00948) Accession : YP_003173638.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 937554 - 939917 bp Length : 2364 bp Strand : + Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGCCAATATTCTTAGAAAATGGGTCGAAAGCGATAAGCGAGAAATCGGTCGCCTCGGCAAAATCGCTGATCAAGTTCA GCGCTATGAAGATGAATATGCAGCATTATCAGATGATCAATTAAAAGCAAATACCCAAAAATTCAAGGATCGCCTTGCAG CAGGGGCAACGTTAGACGATATTTTACCGGAAGCTTTTGCCACCGCGCGTGAAGGGGCTAAACGAGTTTTAGGGTTATTC CCGTTTCGGGTTCAAATTATTGGCGGGATCGTTTTACATGAAGGCAATATTGCGGAAATGAAAACCGGTGAAGGTAAAAC TTTGACGGCAACCATGCCCGTTTATTTGAATGCCTTGACTGGTAAAGGTGTCCACGTGGTTACCGTTAACGAGTACTTGT CCACGCGTGATGCAACGGAAATGGGCGAGTTGTACAATTGGCTCGGTCTCAGCGTCGGGTTGAATCTTAACTCCAAGAAC AGTGACGAAAAACGCGAAGCCTATAATTGCGATATCACTTATTCCACCAATAGTGAACTCGGCTTTGACTATTTGCGAGA CAACATGGTGGTTTATAAGGAACAGATGGTACAACGGCCACTGAATTTTGCAATTGTTGATGAAGTTGATTCGATTCTCA TTGATGAGGCCCGGACGCCTTTGATTATTTCCGGTGGCGCAGAAAAGACAACCGGCCTTTATATTCGGGCGGACCGCTTC GTTAAGACGCTTAAAGCCGATACTGATTACAAGATTGACTGGCCAACGAAGACCATTTCGCTCACTGAAAGCGGCATTCG CAAAGCCGAAAAGAATTTTGGCTTGGATAACCTATACGATACCGAAAATACGGCTTTAACCCACCATATCGACCAAGCAT TGCGGGCAAATTACATTATGCTTAAAGATATCGACTATATGGTGTCTAACGGCGAAGTGCTGATTGTCGATCAATTTACC GGTCGGGCAATGGAAGGCCGGCGCTATTCCGATGGCTTGCATCAGGCAATTGAAGCCAAAGAAGGGGTACAAATCCAGGA TGAAAATAAGACGATGGCTAACATCACTTATCAAAACTTCTTCCGGATGTACACCAAGCTGGCAGGGATGACTGGGACCG CTAAAACGGAGCAAGAAGAGTTCCGCGAAATCTATAATATGGAAGTTATTTCGGTTCCAACCAATAAACCGGTTATCCGG GTTGACTCACCGGATGTTTTGTACCCGACTTTGGATGCTAAATTCAATGCGGTTGTTGACGATATCAAAAAACGCCATAA AAAAGGACAGCCGATTCTGGTTGGGACGGTTGCGATTGAGTCGAGTGAACGCCTGAGTAAGCAATTAGATGATGAAAAGA TCCCGCACACGGTTTTGAATGCGAAGAACCACTTTAAAGAAGCGGAAATCATCATGAATGCCGGGCAACGAGGCGCCGTG ACAATTGCGACCAACATGGCTGGTCGTGGGACGGATATTAAATTAGGCCCTGGTGTCACCGAGTTAGGCGGTTTGGCTGT TATTGGGACTGAGCGGCATGAGAGTCGCCGAATTGATAATCAATTACGTGGCCGTTCCGGTCGTCAAGGTGATCCGGGTT CTACCCAATTTTACCTGAGTCTAGAAGATGACTTGATGAAACGGTTTGGCTCTGAGCGGATTAAAGCAATGCTGGATCGG TTCAAGGTTGCCGATGACGATCAGGTCATTCAAAGTCGAATGATCTCACGGCAGGTTGAATCAGCGCAGAAGCGTGTCGA AGGGAATAACTACGACACACGTAAAAACACGCTGCAGTATGATGATGTGATGCGTGAACAGCGTGAAGTCATCTATAAGC AGCGTCAGCAGATTATCAATGAAGACGAGACCCTCAAGCCCGTTTTGATGGCGATGATTAATCGAACCATCACCCGCATC GTTCAAACGCATACCCAAGGCGATCAAAAGGATTGGAATCTTGATGCGTTGTATGCTTGGATCACCGCAAACATGGCCGA TCCGGAGAAATTCAAGCGCAGCGAACTTGATGGCAAGTCGCAAGATGAGCTCATCGGTTTACTGGCGGATATGGCTGAAA ATAACTTCCAGCATAAAAACAAGCAACTTGGCGATGACGCGCAGATGCTAGAATTCGAAAAAGTGGTCATCTTACGCGTT GTTGACTCAGCTTGGACGGATCACATTGACGCCATGGATCAACTACGCCAGTCTATTGGTTTGCGTGGTTATGGGCAGAT GAATCCGCTAGTCGAATATCAAGAAGAAGGCTACCGGATGTTTGAGGAAATGATTGCGTCAATTGATGATGATGTGACCC GACTGTTCATGAAAGCCGAAATTCGGCAAAATATTCGCCGTTAA Protein sequence : MANILRKWVESDKREIGRLGKIADQVQRYEDEYAALSDDQLKANTQKFKDRLAAGATLDDILPEAFATAREGAKRVLGLF PFRVQIIGGIVLHEGNIAEMKTGEGKTLTATMPVYLNALTGKGVHVVTVNEYLSTRDATEMGELYNWLGLSVGLNLNSKN SDEKREAYNCDITYSTNSELGFDYLRDNMVVYKEQMVQRPLNFAIVDEVDSILIDEARTPLIISGGAEKTTGLYIRADRF VKTLKADTDYKIDWPTKTISLTESGIRKAEKNFGLDNLYDTENTALTHHIDQALRANYIMLKDIDYMVSNGEVLIVDQFT GRAMEGRRYSDGLHQAIEAKEGVQIQDENKTMANITYQNFFRMYTKLAGMTGTAKTEQEEFREIYNMEVISVPTNKPVIR VDSPDVLYPTLDAKFNAVVDDIKKRHKKGQPILVGTVAIESSERLSKQLDDEKIPHTVLNAKNHFKEAEIIMNAGQRGAV TIATNMAGRGTDIKLGPGVTELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGSTQFYLSLEDDLMKRFGSERIKAMLDR FKVADDDQVIQSRMISRQVESAQKRVEGNNYDTRKNTLQYDDVMREQREVIYKQRQQIINEDETLKPVLMAMINRTITRI VQTHTQGDQKDWNLDALYAWITANMADPEKFKRSELDGKSQDELIGLLADMAENNFQHKNKQLGDDAQMLEFEKVVILRV VDSAWTDHIDAMDQLRQSIGLRGYGQMNPLVEYQEEGYRMFEEMIASIDDDVTRLFMKAEIRQNIRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 3e-148 | 42 |
