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Name : treC (LC705_00580) Accession : YP_003173270.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 588426 - 590081 bp Length : 1656 bp Strand : + Note : - DNA sequence : ATGGCGTTTCATAAGAAAGTTATTTATCAGTTATATCCCAAGTCGTTTTACGATAGCGATGGTGATGGTGTCGGCGACTT ACGCGGCATCATTGAAAAGATCGATTATCTCAAGGCACTGCACATCGATATGATCTGGTTCAACCCATTCTTTGTGTCGC CGCAATATGACAACGGCTATGATGTGGCTGATTATCGGCAAATCGATCCGCGGTTTGGAACGATGGCTGATTTTGAAGAG TTGGCGCAAAAACTTAAAGCTGCCGGGATCGACATCATGTTGGACATGGTGCTCAATCATACCAGCACACAACATGTCTG GTTCCAAAAAGCCTTAGCTGGCGACAAGCACTATCAGGATTATTACTACATTCGACCACCAAAGCCGGATGGCAGCTTGC CGACTAACTGGGAGAGCAAGTTTGGCGGTCCGGCTTGGGCCCCGTTTGGCGACACTGGCAATTATTATTTACATTTATAC GAACGTCGCCAGGCTGATCTCGATTGGCATAATCCAGCCGTCCGTCAAGAAGCAGCCGCTATTATTAATTTTTGGCGCGC CAAAGGGGTTCACGGTTTCCGCTTTGATGTGCTCAACGTCATTGGCAAGGCAAATCAGCTGGTTGATGCGCCACCGGAAG TCGAAAGCAAAACATTATATACGGATACACCGATTGTTCAGGATTATATCAAGGAACTAGCCGCCAACAGTTTTGGCCAG GATCTAAATAGCGTCACGGTAGGCGAAATGAGTTCGACCACCATTAAGAACTCAATCGCCTATACCAAGCCGGAAAATCA CGAGTTATCAATGGTTTTCCAATTTCACCATCTGAAAACGGATTATAAGAACGGTGAAAAGTGGAGCAAAATGCCGTACG ACTTCAAGGCACTGCGCAACATTTTGCACACTTGGGGTCAACAGTTAGATCAAGGCGGCGGCTGGCAAGCGCTTTTCTGG AATAATCACGATCAGCCGCGTGCGCTTAATCGGTTTGGTGATGTTGGCCAATATCGCGTTAAAAGTGCCGAAATGCTAGC TGCTGCGATTCACCTAAGTCGCGGGACGCCATACATCTACATGGGCGAGGAAATCGGCATGACCGATCCGCATTATCATT CGATGGCCGATTATGTCGATGTTGAAGCCAAGAATGCTTATCAGGCACTTTTGAAAGCTGGCAAGTCCGAAAAAGAAGCT TTTGCCATCATTTTGGCCAAGGCTCGGGACAATAGCCGGACGCCAATGCAGTGGGATGACACGGCCAACGCCGGATTTAC CACAGGAACACCGTGGTTGCGGCCAACCAATCAGCGCGAAATTAATGTCAAAGCTGAGCTGGCGCATGGTGAAATTTTCC GATTCTATCAAAAATTGATCGCGTTACGTAAGCAGTATCAAGTGATCAGCAATGGCAGTTATGTGCCTTTTGGGACTGAA ATTGATCGCTTGTACGCTTACGAACGGGTTGCTGGCGATGCCCACTTGCTGGTACTGAATAATTTCAGTGATAAAGCCAT TACGGTACCGCTACCGCCACGTTTCCAGCATGCACGCGTTTTGATAACCAATGAAGCAGATTTAACACCAACTGCAACCA TGACGTTGCCACCATACGCAACGATTGCATTGTTGCAGTCAGATAAGGGGGAATAA Protein sequence : MAFHKKVIYQLYPKSFYDSDGDGVGDLRGIIEKIDYLKALHIDMIWFNPFFVSPQYDNGYDVADYRQIDPRFGTMADFEE LAQKLKAAGIDIMLDMVLNHTSTQHVWFQKALAGDKHYQDYYYIRPPKPDGSLPTNWESKFGGPAWAPFGDTGNYYLHLY ERRQADLDWHNPAVRQEAAAIINFWRAKGVHGFRFDVLNVIGKANQLVDAPPEVESKTLYTDTPIVQDYIKELAANSFGQ DLNSVTVGEMSSTTIKNSIAYTKPENHELSMVFQFHHLKTDYKNGEKWSKMPYDFKALRNILHTWGQQLDQGGGWQALFW NNHDQPRALNRFGDVGQYRVKSAEMLAAAIHLSRGTPYIYMGEEIGMTDPHYHSMADYVDVEAKNAYQALLKAGKSEKEA FAIILAKARDNSRTPMQWDDTANAGFTTGTPWLRPTNQREINVKAELAHGEIFRFYQKLIALRKQYQVISNGSYVPFGTE IDRLYAYERVAGDAHLLVLNNFSDKAITVPLPPRFQHARVLITNEADLTPTATMTLPPYATIALLQSDKGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-101 | 42 |
