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Name : treC (LC705_00489) Accession : YP_003173179.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 493026 - 494711 bp Length : 1686 bp Strand : + Note : - DNA sequence : ATGAATGAAATTCCTTGGTGGAAAAACAGCGTTGTTTATCAAGTTTATCCGAAGAGTTTCAACGATAGCAATGGTGATGG GATTGGTGATTTAAACGGAATTACCGAAAAGTTGGATTACTTGGCCGATTTGGGCGTGGATGTGCTCTGGCTGAATCCGA TTTATCGGTCGCCACAAGTTGACAATGGTTATGATATCTCAAATTATCGTGATATTGAACCGCAGCTAGGGACTATGGCT GATTTTGAACAGCTCTTACACGCTGCTCATGATCGGCAGTTAAAGATTATCTTGGACCTGGTGGTTAATCACACATCAGA TCAACATCCATGGTTCAAAGCGGCAAAATCGTCGGTGTCAAACAAGTATCACGATTATTATATCTGGAAAAAGCCGGTTG ATAACCATGTTCCCAATAATTGGGGTTCGAGTTTTGGTGGCTCGGCATGGGCTTATGAGAAAGACTTGGGCGAATATTAC TTACACCTTTTCGCAAGACAGCAGCCGGATCTCAATTGGAAAAATCCCAAGGTCCGGCAAGAAGTTTATGAGCTTATGCG CTTTTGGTTGGATAAAGGCGTCGACGGCTTCCGAATGGATGTTATTTCGCTAATCTCCAAGGACCCTGCTTATCCGGATG GCCCATTAATTCAAGGTAAGGTGTATGGCAGTTATTATGCTGGCGCAGCGAACGGACCTAAGGTTCACAATTACTTACAG GAAATGCATGAACAGGTTTTGTCGCATTACGATATCATGACAGTTGGTGAGACACCGCATACGACAGCCGAACAGGCCCA ACTATATACAGCAGCGAATCGCCACGAGCTGGACATGGTTTTTCACTTTGATCATATGCATCTTGATTATGGCAAATATG GAAAGTTCTCAACGAATCGGTTTAAACTAGTTGATCTTAAAGCGGTGTTGGCTCGTTGGGAGACCACATTAGCGCAGGTC GATGGGTGGAACAGTTTATATTGGAGTAATCATGATCAGCCGCGCCCAGTTACACGTTTTGGAGATGAAGGTCAATATCG GATTCGATCAGCCAAGATGTTAGGGACAGTGTTACACATGCTTCAAGGAACGCCGTTTATTTTTGAAGGTGAAGAACTTG GCCTGAAAAATGTTCGCTTTGATCATTTGAATCAGTACAACGATCTTGAAACTAAGAATATCTTTAGCGAACTGACTAAT CAACATCATGAAAGTCCTGAAGCTGCGATGGAAGCCATTTATCTCCACTCGCGAGATAACGCCCGCACACCAATGCCGTG GGACGGGAGCCAAAAGGGGGGATTTACAACCGGAAAGCCGTGGTTAGAACTAAATCCCGATCATCAACAAATTAATGCTG AAAAGGACTTAGCAGATAGTGACGGTGTCTATCACTATTATCAACGCTTGATTAAGCTGCGACATGAAGAACCGTTAGTT ACAACTGGCGATTTTGAATTGTTGGCTCCAGATGATCCCGATTTGTTTATTTATCTCCGAAGAGGTAAAAATGAAACGTT ATTAGTAGCTGGAAACTTCTCGGAGTCACAACGAAGATGGCCATTACCAGACGCCTTGCAAAATAAGCAAGTAACCACTT TAATTAGCAACGTACCAATAGCTAAACGAGTTGGCAAGATCATCACACTACCACCATTTGGTAGCGTTGTTTATAAACTT CAATGA Protein sequence : MNEIPWWKNSVVYQVYPKSFNDSNGDGIGDLNGITEKLDYLADLGVDVLWLNPIYRSPQVDNGYDISNYRDIEPQLGTMA DFEQLLHAAHDRQLKIILDLVVNHTSDQHPWFKAAKSSVSNKYHDYYIWKKPVDNHVPNNWGSSFGGSAWAYEKDLGEYY LHLFARQQPDLNWKNPKVRQEVYELMRFWLDKGVDGFRMDVISLISKDPAYPDGPLIQGKVYGSYYAGAANGPKVHNYLQ EMHEQVLSHYDIMTVGETPHTTAEQAQLYTAANRHELDMVFHFDHMHLDYGKYGKFSTNRFKLVDLKAVLARWETTLAQV DGWNSLYWSNHDQPRPVTRFGDEGQYRIRSAKMLGTVLHMLQGTPFIFEGEELGLKNVRFDHLNQYNDLETKNIFSELTN QHHESPEAAMEAIYLHSRDNARTPMPWDGSQKGGFTTGKPWLELNPDHQQINAEKDLADSDGVYHYYQRLIKLRHEEPLV TTGDFELLAPDDPDLFIYLRRGKNETLLVAGNFSESQRRWPLPDALQNKQVTTLISNVPIAKRVGKIITLPPFGSVVYKL Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-139 | 52 |
