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Name : treC (LC705_02679) Accession : YP_003175369.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2712578 - 2714260 bp Length : 1683 bp Strand : + Note : - DNA sequence : ATGCACAAAAGTTGGTGGCAAGAAGCAGTGGTTTATCAGGTTTACCCCCGCAGTTTTCAAGATAGTAACGGCGATGGTAT CGGTGATTTGCAAGGTATCATCCAGCATTTGGATTACATTAAAGAACTCGGCGCTGATGTTATCTGGCTCAACCCGATTT ACAAATCACCCAACGCCGACAACGGATACGACATTGCGGATTATCAACAAATCATGCCGGAGTTTGGTACCATGACCGAT TTCCAACAACTGTTAAAAGCAGCCCACGCCCGCGGTCTGAAGATGATGATGGATCTGGTCGTCAACCATACCTCTGACGA ACATCCTTGGTTCCAAGCGGCTATGCAAAGTCGCACGGATCCCCATCATGACTGGTATATTTGGCGCGATCCTGTTGATG GTCATGCACCGACTAACTGGCGCGCGGATTTTGGCGGCTCCGCTTGGACGTATGTACCGGAAGTCGGCCAGTATTATCTG CACCTTTTTGCGGTCAAACAGCCTGATCTGAATTGGACAAACCCCGCCGTGCGCAAGGCCGTTTTTGACATGATGACGTG GTGGTGTGATCAAGGGATTGATGGTTTTCGAATGGATGTTATCAATCTAATTTCAAAGCCTGAAGTTTTTGCTGATGATC CACACCTTTTGGAACAGCCAAACGGCAACTCGCTGGGCTTAATTGCCAATGGTCCGCACGTGCACGAGTACTTACGCGCG ATGAACAAGGCAGTTTTGTCCAAGCACGATCTTATGACAGTTGGCGAGGCACCCGGCGTTACCCCCGCCTTGGCACTTCA ATATACTGGTTTCGATCGCCACGAGCTTGAAATGGTCTTCCAGTTTAAACATGTTGGCCTTGATAACGATCCACAATTCG GCAAGTGGTCACTCAAGCATCCCCAGTTAATCGATCTAAAACGCGTCCTATCCGATTGGCAAACTGCACTACACGGTAAG GCTTGGAACAGTTTGTATTGGGATAATCACGATCAAGCCCGCGCTGTTTCGCGTTTCGGAGACGATCGCCAGGCTTTTCG GGTTCGCTCTGCCAAAATGCTCGCCGCCACCTTGCATTTTCTGGAAGGGACGCCTTACATCTATCAAGGTGAAGAGCTTG GCATGACCAACGTTGCCTTTCCATCCATTCACGATTATCGCGATCTCGACACCCTAAACGCTTGGCATGAACTTGTTGAA CAGCAACACGCTCTTGCGCCAGAGGATATGTTAAAAAGAATTCACCGTCGTTCCCGCGATAACGCTCGAACCCCGATGCA ATGGTCAACTGCGCCGCAAGCCGGCTTCACCGCAGGCACCCCTTGGCTAGCCGTGAACCCAAACTACCCGGACATTAACG CAACCGCTGCACTAGCAGATTCCGACTCGGTCTTCTTCTTTTATCAAAAACTCATTCGGCTGCGTAAACAATACCCCGAT CTGATTGTTTACGGCGCTTACACCTTACTCGACTCAGACGACCCTGATGTGTACATGTACCAGCGCCAGGCCGCCAATCA AGAACTGCTCGTCATCAGCAACTTCACCGACCAAACGTTGACTCGCAATATCGCCAAAAAGCTGTCACCTTCAGCCAAAC TACTCATCAGCAACTATGACGACGATGCTGAAAACACGCTCCGGCCTTATGAAACTAAAGCGTATTTAATCATTGAGCGA TAG Protein sequence : MHKSWWQEAVVYQVYPRSFQDSNGDGIGDLQGIIQHLDYIKELGADVIWLNPIYKSPNADNGYDIADYQQIMPEFGTMTD FQQLLKAAHARGLKMMMDLVVNHTSDEHPWFQAAMQSRTDPHHDWYIWRDPVDGHAPTNWRADFGGSAWTYVPEVGQYYL HLFAVKQPDLNWTNPAVRKAVFDMMTWWCDQGIDGFRMDVINLISKPEVFADDPHLLEQPNGNSLGLIANGPHVHEYLRA MNKAVLSKHDLMTVGEAPGVTPALALQYTGFDRHELEMVFQFKHVGLDNDPQFGKWSLKHPQLIDLKRVLSDWQTALHGK AWNSLYWDNHDQARAVSRFGDDRQAFRVRSAKMLAATLHFLEGTPYIYQGEELGMTNVAFPSIHDYRDLDTLNAWHELVE QQHALAPEDMLKRIHRRSRDNARTPMQWSTAPQAGFTAGTPWLAVNPNYPDINATAALADSDSVFFFYQKLIRLRKQYPD LIVYGAYTLLDSDDPDVYMYQRQAANQELLVISNFTDQTLTRNIAKKLSPSAKLLISNYDDDAENTLRPYETKAYLIIER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-153 | 57 |
