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Name : lysS (LC705_02514) Accession : YP_003175204.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2550340 - 2551836 bp Length : 1497 bp Strand : - Note : - DNA sequence : TTGGCTAAGGATAACGGACAGCAACCAGAAATGAACGATCAAATGATTGCGCGGCGGGAAAAGATGGATGCCTTGCGAGA AGCAGGAATTGATCCATTCGGTCACCGGTTTGACCGCACGCACTCTGCAGCAAAGGTACGTGAAGAATTTGGCGAAGACG ACAAGGAAACGCTACTCGAAGAAAAGCCGGAAGTGACGATTGCTGGACGCATGATGTCCAAACGCGGTAAAGGTAAAGTC GGGTTCGCTGACATCCGTGATCGCAGCGGTAAAATGCAGATCTATGTTCGTAAAGACGTGGTTGGCGATGAAAACTACAT GATCTTTAAGAAGGCAGATTTGGGCGATATTTTGGGTATTAGCGGCGAAGTCATGAAAACCGACTCGGGTGAGCTGACTG TCAAAGCCAATCACGTGACGCATCTAGCCAAAGCATTACGCCCATTGCCGGATAAGTGGCATGGCTTAACCGATGTCGAG CAGAAGTACCGCAAGCGATATTTGGACCTTATTTCGAATCCTGACAGTTTTGATCGGTTTGTTAAACGCACCAAAATCGT GAGTGCTGTTCGTGAATACTTGGATAACCACGGATTTCTTGAAGTCGAGACTCCGGTTTTGCATAATCAGGCCGGTGGTG CGAATGCGCGGCCATTCATCACGCACCATAATGCGTTGGATATCGATCTTTATTTGCGCATTGCATTGGAATTGCACTTG AAGCGGTTGATCGTTGGTGGCATGGAGCGTGTTTATGAAATCGGCCGCGTTTTCCGCAACGAAGGCATCGACACGAAACA TAATCCGGAGTTTACGGAGCTAGAAACCTACGCCGCTTATTGGGATCTATCCGATGTCATGGTCGAAACCGAGGGCATCT TTAGATTTGCCGCCCACAAAGTCCTTGATTCCGGGAAACTAACTTATCAAGGGATGGACATTGACTTAGATGCACCATTT GCCCGTATCAACATGTTAGACGCTATCAAGGATAAAACCGGCGTTGACTTCTGGCCGGAAATGACTGTAGATGAAGCGCG TAAGTTAGCTGATGACCATGAAGTTCACTACGAACCTTATTGGAAGGTCGGGCATATTATCAGTGCCTTCTTTGATCAGT TTGTTGAATCAACGCTTATTCAACCGACCTTCATTACCGGCCATCCAATCGAAGTTTCCCCGTTAGCTAAGAAGAATCCA AAAGATACACGATTTGTTGAGCGTTTTGAACTTTTTGTCGGTGGCGGTGAGTACGCCAATGCCTTCACCGAATTAAACGA TCCGATTGATCAGCGTCAGCGTTTTGAAGCGCAAGCAGCTGAAAAAACGGCAGGCAATGAAGAGGCACAAGGTATTGATG ACGATTATGTTGAAGCGTTGGAATATGGCATGCCGCCAACAGGTGGACTCGGAATCGGCATTGATCGCTTAGTTATGCTG TTAACCGATGCACCGTCAATTCGCGATGTTCTTTTGTTCCCAACATTGCGCCCGTAG Protein sequence : MAKDNGQQPEMNDQMIARREKMDALREAGIDPFGHRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKV GFADIRDRSGKMQIYVRKDVVGDENYMIFKKADLGDILGISGEVMKTDSGELTVKANHVTHLAKALRPLPDKWHGLTDVE QKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHL KRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPF ARINMLDAIKDKTGVDFWPEMTVDEARKLADDHEVHYEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNP KDTRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAGNEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVML LTDAPSIRDVLLFPTLRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-112 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003175204.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-112 | 46 |
