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Name : clpL (LC705_02033) Accession : YP_003174723.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2058857 - 2061007 bp Length : 2151 bp Strand : - Note : - DNA sequence : ATGGCAAACTTTAACGATCCGTTTTTCAATCATGACATGGACGATGTATTCAATCAGATGCTTCAAGGAATGGGTAAAGG CGAGTCAGCCCGTTATGTGGTGAATGGCCACGAAATGACGCCGGATGAATTTGCGCAGTATCGTGCGACCGGCCAGCTGC CAAAGCAAGGCGATGAAATCCCGGTTGAAACGACTGGCGAACAAGCCGTCAAGAAAGGCGGTATTCTTGAAAAGCTTGGC CGCAACCTGACGCAAGAAGCCAAGGATGGTCTGCTTGATCCGGTGATTGGCCGTGATCACGAAATTCAGGAAACTGCCGA AATTTTGAGTCGGCGGACGAAGAATAATCCAATTTTGGTCGGTGACGCCGGTGTCGGCAAGACCGCGGTGGTTGAAGGCT TGGCACAAGCGATTGTGAAGGGCAATGTACCTGAATCAATTAAAGACAAGCAGATTTGGTCGATTGATCTGTCGAATCTG GAAGCAGGCACGCAATATCGTGGCAGCTTTGAAGAAAAGATTCAGAATCTGATCAAAGAAGTGAAAGCTGCTGGCAATGT GATTCTGTTCTTTGATGAAATCCATCAAATTCTTGGCGCCGGTGCAACTGGTGGCGAAGAGTCTGGCGGTAAGGGGCTCG CGGATATTATCAAGCCGGCTTTGTCGCGTGGTGAAATCACTGTGATCGGTGCGACGACGCAGGATGAATATCGCAATACC ATTATGAAGGACAGCGCCTTGGCACGTCGGTTTAACGATGTCACGATCAATGAACCGAGTGCTGCCGACACAGTCAAGAT TCTGGAAGGCGTCAAGAAGCTTTACGAACAGCATCATCACGTTCAGTTACCGGAAAATGTTTTGAAGGCGGCGGTGGATT ACAGTATTCAATATATTCCACAGCGCTCCTTGCCGGATAAAGCAATTGACCTCATTGATATGACCGCGGCACACTTAGCC AGCAAGCATCCGATTGTTGACAAGGTGGAACTGGAAAAGCAAATCAAGGATCTCAACGCGCAAAAGGATGCAGCGGCAAA AGCTGAAGATTTTGAAAAAGCTGCCAACCTTAAGAAGGAGATTGCCGACAAGCAACATCAGCTTGAAGGAACGAACAACG AGAAGCCTGTCGTCGCAACCCCGAATGATGTCGCTGCAGCTGTTGAACGTTTGACTGGCATTCCGGTTTCCAAGCTGGGT GCATCCGATATTGAACGGCTGAAAGGCATTGGTAAGCGCCTGAAGGGTAAGGTAATTGGCCAAGACGAAGCCGTTGATAT GGTTGCCCGCGCTATTCGCCGGAACCGGGCTGGCTTTGATGAAGGTAACCGCCCAATTGGCAGCTTCCTGTTTGTTGGAC CAACCGGTGTCGGGAAGACTGAATTAGCTAAGCAGTTGGCGTTAGATCTTTTCGGCAGTAAAGATGCGATCATCCGGTTA GATATGTCCGAATATAGCGATCGTACAGCGGTATCCAAACTGATTGGCACCAGCGCAGGCTATGTTGGCTACAATGACAA CAAGAACACGCTGACAGAGCAAGTACGGCGCAATCCTTATTCCATCGTCTTACTCGATGAAATCGAAAAGGCTGATCCAC AAGTCTTGACGCTGTTGCTGCAAGTCTTAGACGATGGTCGGTTAACAGATGGCCAAGGTAATGTCGTTGACTTTAAGAAT ACCGTCATCATTGCCACTTCCAATGCTGGGTTTGGCAATGAAGCATTAACTGGCGAGAAGGAGAAGGACGAAGATTTGAT GAAACGGTTGGCGCCTTACTTCCGTCCTGAATTTCTGAACCGGTTTAACGGGATTGTTGAATTCAGTCACTTAACCAAGA ATGATTTGGGTAAGATCGTTGACTTGATGCTTGAAGACGTCAACAAGACTTTGGCGAAGAAAGGCATCACGCTCACCGTG ACGGATGCAGCCAAAGATTGGTTGATTGCCCAAGGTTACGATGAAGCGATGGGTGCACGACCATTACGGCGGGTCATTGA ACGCAACATCCGCGATAAGGTTACCGACTTCTACCTGGATCACCTGAAGGCTAAGAAGTTACAGGCTGACTTGATTGATG GTGCGATTATCGTCAGTGAAGTGCAACCAGCAAGCGACAAGCCAAAGAAAGAAGCTAGCGGTGCGAAGTAA Protein sequence : MANFNDPFFNHDMDDVFNQMLQGMGKGESARYVVNGHEMTPDEFAQYRATGQLPKQGDEIPVETTGEQAVKKGGILEKLG RNLTQEAKDGLLDPVIGRDHEIQETAEILSRRTKNNPILVGDAGVGKTAVVEGLAQAIVKGNVPESIKDKQIWSIDLSNL EAGTQYRGSFEEKIQNLIKEVKAAGNVILFFDEIHQILGAGATGGEESGGKGLADIIKPALSRGEITVIGATTQDEYRNT IMKDSALARRFNDVTINEPSAADTVKILEGVKKLYEQHHHVQLPENVLKAAVDYSIQYIPQRSLPDKAIDLIDMTAAHLA SKHPIVDKVELEKQIKDLNAQKDAAAKAEDFEKAANLKKEIADKQHQLEGTNNEKPVVATPNDVAAAVERLTGIPVSKLG ASDIERLKGIGKRLKGKVIGQDEAVDMVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRL DMSEYSDRTAVSKLIGTSAGYVGYNDNKNTLTEQVRRNPYSIVLLDEIEKADPQVLTLLLQVLDDGRLTDGQGNVVDFKN TVIIATSNAGFGNEALTGEKEKDEDLMKRLAPYFRPEFLNRFNGIVEFSHLTKNDLGKIVDLMLEDVNKTLAKKGITLTV TDAAKDWLIAQGYDEAMGARPLRRVIERNIRDKVTDFYLDHLKAKKLQADLIDGAIIVSEVQPASDKPKKEASGAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-116 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpL | YP_003174723.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0080 | Protein | 4e-126 | 50 |
| clpL | YP_003174723.1 | ATP-dependent Clp protease ATP-binding subunit | VFG0079 | Protein | 2e-115 | 46 |
