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Name : clpE (LC705_01805) Accession : YP_003174495.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1819227 - 1821455 bp Length : 2229 bp Strand : + Note : - DNA sequence : ATGTTATGTGAAAACTGTCATAAGAATCCAGCCACTATTCATCTTTCAACCGTTGTTAATGGTACTCGGCAAGAAATCAA TCTTTGCCAGAACTGTTATCAATTACTCAAGAAACAAGCAGGAGGAAATATGAATCCAACCAACGCATCCGATCCATTTG GGTTTGGAAGCTTAGATGATATTTTCCGTGCGATGAATCAGGGAATGGATCAACCGCAACAGCCAAACGCACAGGTTCCG CCTACCCAGGCAGGACGCGGCGGCAACGGCAACAATGGCCGCAATGGCAACGGCGGTAAAGGCTTGTTAGGTCAGTTTGG TGTTGATCTCACTGAACAGGCACGCAAAGGTCAAATTGATCCAGTCATCGGTCGTGATAAGGAAATTTCACGCGTGATTG AAATTCTGAATCGCCGGACCAAGAATAATCCAGTTTTAATCGGTGAAGCCGGGGTCGGCAAAACCGCGGTTGTTGAGGGA CTGGCCTTAAAGATTGCTAATGGTGACGTTCCAGCCAAGTTGCAGGATCGCCATGTAATTCGCCTTGATGTCGTTTCACT CGTTCAAGGCACAGGCATTCGCGGTCAATTCGAGCAGCGCATGCAACAACTGATTGACGAACTGAAGCAAAATAAGAATA TTATCCTATTTATTGATGAAATCCACGAAATTGTGGGTGCCGGTAATGCTGAAGGCGGGATGGACGCCGGCAACGTCTTG AAACCCGCATTGGCTCGTGGCGAATTACAACTAGTCGGGGCAACGACCAGCAACGAATACCGTCAGATTGAAAAAGATTC TGCCCTTGCTCGGCGCCTTCAGCCAGTGATGGTTGAAGAGCCTAGCGTTGATGAAACCATTAAAATTCTGAAGGGTCTGC AACCGCGCTATCAAGACTTCCACCATGTGAAATACACGGAAGGTGCGATTGAAGCTGCGGCAACCCTCAGCAATCGTTAC ATTCAGGATCGCTTCCTCCCTGATAAAGCCATTGACTTGTTAGACGAAGCCGGTTCACGCAAGAACCTGACAATTGCAAC CGTGGATCCTGAGACCATTAAAGCTAAGATTGCTGATGCCGAAAAGCAAAAGCAAGCCGCACTCAAGCAGGAAGACTATG AAAAAGCCGCCTTCTATCGTGATCAGGTCACCAAGTTAGAAGACATGGCCAAAAAGCAATCCAACCTGCCAGATAATGAA ATCCCAACAGTTACCGAAAAAGACATGGAAAAAATTGTTGAAGAAAAGACAAACATTCCAGTCGGTGAACTCAAAGCTCA GGAACAGGCGCAACTGAAGAATCTCGCCAGTGACCTTGAGCAACACGTCATTGGTCAAAATGAAGCAGTTGATAAAGTTG CTCGAGCAATTCGGCGCAATCGCATCGGCTTCAATAAGACCGGGCGACCAATTGGCTCATTCCTCTTTGTCGGACCAACC GGTGTCGGCAAAACGGAACTGGCAAAACAGCTCGCGAAAGAACTATTCGGTTCTGAAGATGCCATGATTCGGTTTGATAT GTCGGAATACATGGAGAAGTTCAGCGTCTCTAAGCTCATCGGGTCACCGCCAGGCTATGTCGGCTATGAAGAAGCCGGCC AGCTAACTGAAAAAGTTCGGCGCAATCCATACAGTTTGATTCTGCTTGATGAAATCGAAAAAGCCCACCCGGATGTCATG AACATGTTCCTGCAGATTCTGGATGACGGCCGCCTAACCGATTCACAAGGTCGAACTGTTTCCTTCAAAGATACTATCAT CATCATGACTTCTAACGCCGGATCAACTGATGCGGAAGCTAACGTAGGCTTTGGTGCAACGTTAAGCGGTAAAACCCACA GTGTGCTGGATCAGCTGGGTAACTACTTCAAACCAGAATTCCTGAATCGCTTTGATGACATTGTTGAATTCAAGCCGCTT TCTAAAGACGACCTATTGAAGATTGTGTCACTGATGATTAATGACACTAACAACAATCTCAAGAGTCAGGGATTAACGAT TCATGTCACCGATCCCGTCAAGGAAAAGCTTGTCACTCTGGGTTACAATCCATCCATGGGGGCACGGCCATTGCGTCGGG TTATCCAGGAACAGATTGAAGACCGTGTGGCTGACTTTTACCTCGACCATCCTAATGCCAAGGAACTTGAAGCAAGGATC AGCAACGGAGAAATCACAGTTGGCGAACCAGCCAAGGCAGAAGCCTCTTCAAAAACAGCCAAGAAATAA Protein sequence : MLCENCHKNPATIHLSTVVNGTRQEINLCQNCYQLLKKQAGGNMNPTNASDPFGFGSLDDIFRAMNQGMDQPQQPNAQVP PTQAGRGGNGNNGRNGNGGKGLLGQFGVDLTEQARKGQIDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEG LALKIANGDVPAKLQDRHVIRLDVVSLVQGTGIRGQFEQRMQQLIDELKQNKNIILFIDEIHEIVGAGNAEGGMDAGNVL KPALARGELQLVGATTSNEYRQIEKDSALARRLQPVMVEEPSVDETIKILKGLQPRYQDFHHVKYTEGAIEAAATLSNRY IQDRFLPDKAIDLLDEAGSRKNLTIATVDPETIKAKIADAEKQKQAALKQEDYEKAAFYRDQVTKLEDMAKKQSNLPDNE IPTVTEKDMEKIVEEKTNIPVGELKAQEQAQLKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGSFLFVGPT GVGKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVM NMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSTDAEANVGFGATLSGKTHSVLDQLGNYFKPEFLNRFDDIVEFKPL SKDDLLKIVSLMINDTNNNLKSQGLTIHVTDPVKEKLVTLGYNPSMGARPLRRVIQEQIEDRVADFYLDHPNAKELEARI SNGEITVGEPAKAEASSKTAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-157 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003174495.1 | ATP-dependent clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 60 |
| clpE | YP_003174495.1 | ATP-dependent clp protease ATP-binding subunit | VFG0079 | Protein | 5e-156 | 52 |
