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Name : pdhD (LC705_01337) Accession : YP_003174027.1 Strain : Lactobacillus rhamnosus Lc 705 Genome accession: NC_013199 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1327985 - 1329388 bp Length : 1404 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTTGTAGGCGATTTTGCAATCGATTTGGACACCGTTGTGATTGGCTCTGGCCCAGGTGGTTACGTAGCTGCGATCCG AGCAGCCGAAATGGGTCAAAAGGTAACTGTTATCGAGAATACCTTCATTGGCGGGGTTTGTTTGAATGTTGGCTGTATTC CATCAAAAGCTTTGATCAATGCCGGTCACCGTTATCAAGATGCCTTGGAAGCAAGCACGTTTGGTATTAATGCCAAGGGT GCGGATCTTGATTTCAAAAAAACCCAGGATTGGAAGCAAAACAAGGTTGTACACACGTTAACCAGCGGTGTTGCGATGCT TTTAAAAAAGCACAAAATCGAAACCATTATGGGGACGGCTTTCTTGAAAGATGATCATAGTCTGCGGGTTATGCAAAAAG ACTCGGCTCAGACATACACCTTCAAGAATTTGATCATTGCAACCGGAAGCCGGCCAATTGAAATCAAAGGCTTCAAATTT GGCAAACGGATTTTGGATTCAACCGGTGGCCTAAACTTACCGGAAGTACCAAAAGAATTCGTGGTGATTGGCGGTGGCTA CATCGGATCCGAACTGGCGAGCGCCTATGCTAACCTAGGCGCACATGTCACAATTCTTGAAGGCACCAGCTCAATTTTGC CAAACTTTGAAAAGGATATGGTTCAACTCGTCTTGAACTCCTTTAAAAAGCGCGGCGTTACAGTGATTACCAACGCGATG GCGAAGGAAGCCGAAGATACCGGCAATGGCGTCAAGGTAACCTATACAGCGGACGGTAAAGAACAAACCATTGCCGCAGA TTATGTGATGGTCACAGTCGGGCGGCGGCCAAATACCGATGATTTGGGCTTAGACATTGTTGGCATTGAAACAACGGATC GCGGCTTGATCAAAGTCGATGCGCAAGGACGAACCAATAAGCCTAATATTTATGCAATCGGTGACATTGTTCCTGGTGCT GCATTAGCGCATAAAGCAAGTTATGAAGGTAAGATAGCGGCAGAGGCGATCAGTGGCAAGGCAAGCGCGGTTGACTATAA AGCAATGCCGGCGGTTTGTTTCACGGATCCGGAACTGGCCACAACCGGCATGACGCTTGCTGAGGCAAAGGATAAAGGCA TCAAAGCTAAAGCAAGCAAGTTTCCATTTGCGGCGAATGGCCGTGCTTTAAGTTTGGCGCAAACCGAGGGCTTCGTTCGT CTGGTTACGGATGAAAACGGAACCGTCATCGGTGGTCAAGTTGCTGGCGCCGGTGCCAGTGATTTGATCTCAGAATTGAC GGTCGCCGTTGAAGGTGGACTCAACGCTGAAGATTTGGCGTTGACCATCCATCCACATCCGACCTTAAGTGAAACCATTA TGGATGATGCTGAAGTTGCATTAGGGTTGCCAATTAATATCTAG Protein sequence : MVVGDFAIDLDTVVIGSGPGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDALEASTFGINAKG ADLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSLRVMQKDSAQTYTFKNLIIATGSRPIEIKGFKF GKRILDSTGGLNLPEVPKEFVVIGGGYIGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAM AKEAEDTGNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNKPNIYAIGDIVPGA ALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLAEAKDKGIKAKASKFPFAANGRALSLAQTEGFVR LVTDENGTVIGGQVAGAGASDLISELTVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-103 | 48 |
