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Name : treC (LGG_00602) Accession : YP_003170348.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase (GH13) Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 612560 - 614215 bp Length : 1656 bp Strand : + Note : - DNA sequence : ATGGCGTTTCATAAGAAAGTTATTTATCAGTTATATCCCAAGTCGTTTTACGATAGCGATGGTGATGGTGTCGGCGACTT ACGCGGCATCATTGAAAAGATCGATTATCTCAAGGCACTGCACATCGATATGATCTGGTTCAACCCATTCTTTGTGTCGC CGCAATATGACAACGGCTATGATGTGGCTGATTATCGGCAAATCGATCCGCGGTTTGGAACGATGGCTGATTTTGAAGAG TTGGCGCAAAAACTTAAAGCTGCCGGGATCGACATCATGTTGGACATGGTGCTCAATCATACCAGCACGCAACATGTCTG GTTCCAAAAAGCCTTAGCTGGCGACAAGCACTATCAGGATTATTACTACATTCGACCACCAAAGCCAGATGGCAGCTTGC CGACTAACTGGGAAAGCAAGTTTGGCGGTCCGGCTTGGGCCCCATTTGGCGACACTGGCAATTATTATTTACATTTATAC GAACGTCGCCAAGCTGATCTCGATTGGCATAATCCAGCCGTCCGTCAAGAAGCAGCCGCTATTATTAATTTTTGGCGCGC CAAAGGGGTTCACGGTTTCCGCTTTGATGTGCTCAACGTCATTGGCAAGGCAAATCAGCTGGTTGATGCGCCACCGGAAG TCGAAAGCAAAACATTATATACGGATACACCGATTGTTCAGGATTATATCAAGGAGCTAGCCGCCAACAGTTTTGGCCAG GATCCAAATAGCGTCACGGTAGGCGAAATGAGTTCGACCACCATTAAGAACTCAATCGCCTATACCAAGCCGGAAAATCA CGAGTTATCAATGGTTTTCCAATTTCACCATCTGAAAACGGATTATAAGAACGGTGAAAAGTGGAGCAAAATGCCGTACG ACTTCAAGGCACTGCGCAACATTTTGCACACTTGGGGTCAACAGTTAGATCAAGGCGGCGGCTGGCAAGCGCTTTTCTGG AATAATCACGATCAGCCGCGTGCGCTTAATCGGTTTGGTGATGTTGGCCAATATCGCGTTAAAAGTGCCGAAATGCTAGC TGCCGCGATTCACCTAAGTCGCGGGACACCATACATCTACATGGGCGAGGAAATCGGCATGACCGATCCGCATTATCATT CGATGGCCGATTATGTCGATGTTGAAGCCAAAAATGCTTATCAGGCATTACTGAAAGCGGGTAAGTCCGAACAAGAAGCG TTTGCCATTATTGTGGCCAAGGCGCGGGACAATAGCCGGACGCCAATGCAGTGGGATGACACGGCCAACGCCGGATTTAC CACAGGAACACCGTGGTTGCGGCCAACCAATCAGCGCGAAATTAATGTCAAAGCTGAGCTGGCGCATGGTGAAATTTTCC GATTCTATCAAAAATTGATCGCGTTACGCAAGCAGTATCAAGTGATCAGCGATGGCAGTTATGTGCCTTTTGGGACTGAA ATTGATCGCTTGTACGCTTACGAACGAGTTGCTGGCGATGTCCACTTGCTGGTACTGAATAATTTCAGTGATAAAGCCAT TACGGTACCGCTACCGCCACGTTTCCAGCATGCACGCGTTTTGATAACCAATGAAGCAGATTTAACACCAACTGCAACCA TGACGTTGCCACCATACGCAACGATTGCATTGTTGCAGTCAGATAAGGGGGAATAA Protein sequence : MAFHKKVIYQLYPKSFYDSDGDGVGDLRGIIEKIDYLKALHIDMIWFNPFFVSPQYDNGYDVADYRQIDPRFGTMADFEE LAQKLKAAGIDIMLDMVLNHTSTQHVWFQKALAGDKHYQDYYYIRPPKPDGSLPTNWESKFGGPAWAPFGDTGNYYLHLY ERRQADLDWHNPAVRQEAAAIINFWRAKGVHGFRFDVLNVIGKANQLVDAPPEVESKTLYTDTPIVQDYIKELAANSFGQ DPNSVTVGEMSSTTIKNSIAYTKPENHELSMVFQFHHLKTDYKNGEKWSKMPYDFKALRNILHTWGQQLDQGGGWQALFW NNHDQPRALNRFGDVGQYRVKSAEMLAAAIHLSRGTPYIYMGEEIGMTDPHYHSMADYVDVEAKNAYQALLKAGKSEQEA FAIIVAKARDNSRTPMQWDDTANAGFTTGTPWLRPTNQREINVKAELAHGEIFRFYQKLIALRKQYQVISDGSYVPFGTE IDRLYAYERVAGDVHLLVLNNFSDKAITVPLPPRFQHARVLITNEADLTPTATMTLPPYATIALLQSDKGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-100 | 42 |
