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Name : treC (LGG_02696) Accession : YP_003172442.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : alpha,alpha-phosphotrehalase (GH13) Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2759202 - 2760884 bp Length : 1683 bp Strand : + Note : - DNA sequence : ATGCACAAAAGTTGGTGGCAAGAAGCAGTGGTTTATCAGGTTTACCCCCGCAGTTTTCAAGATAGTAACGGCGATGGTAT CGGTGATTTACAAGGTATCATCCAGCATTTGGATTACATTAAAGAACTCGGCGTTGATGTTATCTGGCTCAACCCGATTT ACAAGTCACCCAACGCCGACAACGGATACGACATTGCGGATTATCAACAAATCATGCCGGAGTTTGGTACCATGGCCGAT TTCCAACAACTGTTAAAAGCAGCCCACGCCCGCGGTTTGAAAATGATGATGGATCTGGTCGTCAACCATACCTCTGACGA ACATCCTTGGTTCCAGGCGGCTAAACAAAGTCGCACGGATCCCCATCATGACTGGTATATTTGGCGCGATCCCGTCGATG GTCATGAACCGACTAATTGGCGCGCGGATTTTGGCGGCTCCGCTTGGACGTATGTACCGGAAGTCGGCCAGTATTATCTG CACCTTTTTGCGGTCAAACAGCCTGATCTGAATTGGACCAATCCTGCTGTGCGCAAGGCCGTTTTTGACATGATGACGTG GTGGTGTGATCAAAGGATTGATGGCTTTCGAATGGATGTTATCAATCTGATTTCAAAGCCTGATGTTTTTGCTGATGATC CACACCTTTTGGAACAGCCAAACGGTAACTCGCTGGGCTTAATTGCCAATGGTCCGCACGTGCACGAATACTTACGTGCG ATGAACAAGGCGGTTTTGTCCAAGCACGATCTTATGACAGTTGGCGAGGCACCCGGCGTTACGCCCGCCTTGGCACTTCA ATATACTGGTTTCGATCGCCACGAGCTTGAAATGGTCTTCCAGTTTAAACATGTTGGCCTTGATAACGATCCACAATTCG GCAAGTGGTCACTCAAACATCCTCAGTTGACCGATCTAAAACGCGTCCTATCCGATTGGCAAACTGCACTACACGGTAAG GCTTGGAACAGTTTGTATTGGGATAACCACGATCAAGCCCGCGCTGTTTCGCGTTTTGGGGACGATCGCCCTGCTTTTCG GGTTCACTCTGCCAAAATGCTCGCCGCCACTTTGCATTTTCTGGAAGGGACGCCTTACATTTATCAAGGTGAAGAACTTG GCATGACCAACGTTGCCTTCCCATCCATTCACGATTACCGCGACCTCGACACCCTAAACGCTTGGCATGAACTTGTTGAA CAGCAACATGCTCTTGCGCCAGAAGATATGTTAAAAAGAATCCACCGTCGTTCCCGTGATAACGCCCGGACCCCGATGCA ATGGTCACCTGCACCGCAAGCCGGCTTCACCGCAGGCACTCCTTGGCTAGCCGTGAACCCAAACTACACGGACATTAACG CAACCGCTGCACTGGCAGATTCCGATTCGGTCTTCTTCTTTTATCAAAAACTCATTCGGCTGCGTAAACAATACCCTGAT CTGATTGTTTACGGCGCTTACACCTTACTCGACCCAGACGATCCTGATGTATACATGTACCAGCGCCACGCCGCCAAACA AGAACTGCTCGTCATCAGCAACTTCACCGACCAGACGTTGACTCGCGATATCGCCAAACAGCTGTCACCTTCAGCCAAGC TACTCATCAGCAACTATGACGACGACGCTGAAAATACGCTCCGGCCTTATGAAACTAAAGCGTATTTGACCAGTGAGCGA TAG Protein sequence : MHKSWWQEAVVYQVYPRSFQDSNGDGIGDLQGIIQHLDYIKELGVDVIWLNPIYKSPNADNGYDIADYQQIMPEFGTMAD FQQLLKAAHARGLKMMMDLVVNHTSDEHPWFQAAKQSRTDPHHDWYIWRDPVDGHEPTNWRADFGGSAWTYVPEVGQYYL HLFAVKQPDLNWTNPAVRKAVFDMMTWWCDQRIDGFRMDVINLISKPDVFADDPHLLEQPNGNSLGLIANGPHVHEYLRA MNKAVLSKHDLMTVGEAPGVTPALALQYTGFDRHELEMVFQFKHVGLDNDPQFGKWSLKHPQLTDLKRVLSDWQTALHGK AWNSLYWDNHDQARAVSRFGDDRPAFRVHSAKMLAATLHFLEGTPYIYQGEELGMTNVAFPSIHDYRDLDTLNAWHELVE QQHALAPEDMLKRIHRRSRDNARTPMQWSPAPQAGFTAGTPWLAVNPNYTDINATAALADSDSVFFFYQKLIRLRKQYPD LIVYGAYTLLDPDDPDVYMYQRHAAKQELLVISNFTDQTLTRDIAKQLSPSAKLLISNYDDDAENTLRPYETKAYLTSER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-154 | 56 |
