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Name : rpmE2 (LGG_02544) Accession : YP_003172290.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 2610761 - 2611012 bp Length : 252 bp Strand : - Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAGCAAGGCATCCATCCAGATTATCATCTAGTTGTATTTATGGACTCAGCAACTGGTTTCAAATTTATTTCGGGTTC AACCAAAACTTCAAAAGAAACCATTAAGTGGGAAGATGGCAAAGAATATCCGCTGGTTCGGGTTGAAATTTCATCTGATT CACATCCCTTCTACACCGGCAAGCAGAAGTTCACGCAGGCTGATGGTCGGGTTGATCGTTTCAACAAGAAGTACGGCTTC GACAAGAAATAA Protein sequence : MKQGIHPDYHLVVFMDSATGFKFISGSTKTSKETIKWEDGKEYPLVRVEISSDSHPFYTGKQKFTQADGRVDRFNKKYGF DKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 5e-11 | 45 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 5e-11 | 45 |
