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Name : lysS (LGG_02508) Accession : YP_003172254.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2570465 - 2571961 bp Length : 1497 bp Strand : - Note : - DNA sequence : TTGGCTAAGGATAACGGACAGCAACCAGAAATGAACGATCAAATGATTGCGCGGCGGGAAAAGATGGACGCCTTGCGAGA AGCAGGAATTGATCCATTCGGTCACCGGTTTGACCGCACGCACTCTGCAGCAAAGGTACGTGAAGAATTTGGCGAAGACG ACAAAGAAACGCTACTTGAAGAAAAGCCGGAAGTGACGATTGCTGGACGCATGATGTCCAAACGCGGTAAAGGTAAAGTC GGGTTCGCTGACATCCGTGATCGCAGCGGTAAAATGCAGATCTATGTTCGTAAAGACGTGGTTGGCGATGAAAACTACAT GATCTTTAAGAAGGCAGATTTGGGCGATATTTTGGGTATCAGCGGCGAAGTCATGAAAACCGACTCGGGCGAGCTGACCG TCAAAGCCAATCACGTGACGCATCTAGCCAAAGCATTACGCCCATTGCCGGATAAGTGGCATGGCTTAACCGATGTCGAG CAGAAGTACCGCAAGCGATATTTGGACCTTATTTCGAATCCTGACAGTTTTGATCGGTTTGTTAAACGCACCAAAATCGT GAGTGCTGTTCGCGAATACTTGGATAACCATGGATTTCTTGAAGTCGAGACCCCGGTTTTGCATAATCAGGCCGGTGGTG CGAATGCGCGGCCATTTATCACACACCATAATGCGTTGGATATCGACCTTTATTTGCGCATTGCATTGGAATTGCACTTG AAGCGGTTGATTGTTGGTGGCATGGAGCGCGTTTATGAAATCGGCCGCGTTTTCCGTAACGAAGGCATCGACACGAAACA TAATCCGGAGTTTACGGAGCTTGAAACCTACGCCGCTTATTGGGATCTATCCGATGTCATGGTCGAAACCGAGGGCATCT TTAGATTTGCCGCCCACAAAGTCCTTGATTCCGGGAAGCTAACTTATCAAGGGATGGACATTGACTTAGATGCACCATTT GCCCGTATCAACATGTTAGACGCTATCAAGGATAAAACCGGCGTTGACTTCTGGCCGGAAATGAGTGTAGATGAAGCGCG TAAGTTAGCTGATGACCATGAAGTTCACTACGAACCTTATTGGAAGGTTGGTCATATTATCAGTGCCTTCTTTGATCAGT TTGTTGAATCAACGCTTATTCAACCGACCTTCATTACCGGCCATCCAATCGAAGTTTCCCCGTTAGCTAAGAAAAATCCA AAAGATCCACGATTTGTTGAGCGTTTTGAACTTTTTGTCGGTGGCGGTGAGTACGCCAATGCCTTCACCGAATTAAACGA TCCGATTGATCAGCGTCAGCGTTTTGAAGCGCAAGCAGCTGAAAAAACGGCAGGCAATGAAGAGGCACAAGGCATTGATG ACGATTATGTTGAAGCGTTGGAATATGGCATGCCGCCAACAGGTGGACTCGGAATCGGTATCGATCGCTTAGTTATGCTG TTAACCGATGCACCGTCAATTCGCGATGTTCTTTTGTTCCCAACATTGCGCCCGTAG Protein sequence : MAKDNGQQPEMNDQMIARREKMDALREAGIDPFGHRFDRTHSAAKVREEFGEDDKETLLEEKPEVTIAGRMMSKRGKGKV GFADIRDRSGKMQIYVRKDVVGDENYMIFKKADLGDILGISGEVMKTDSGELTVKANHVTHLAKALRPLPDKWHGLTDVE QKYRKRYLDLISNPDSFDRFVKRTKIVSAVREYLDNHGFLEVETPVLHNQAGGANARPFITHHNALDIDLYLRIALELHL KRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTELETYAAYWDLSDVMVETEGIFRFAAHKVLDSGKLTYQGMDIDLDAPF ARINMLDAIKDKTGVDFWPEMSVDEARKLADDHEVHYEPYWKVGHIISAFFDQFVESTLIQPTFITGHPIEVSPLAKKNP KDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKTAGNEEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVML LTDAPSIRDVLLFPTLRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-113 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003172254.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-113 | 46 |
