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Name : clpE (LGG_01823) Accession : YP_003171569.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Virulence Product : ATP-dependent clp protease ATP-binding subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1850605 - 1852827 bp Length : 2223 bp Strand : + Note : - DNA sequence : ATGTTATGTGAAAACTGTCATAAGAATCCAGCCACTATTCATCTTTCAACCGTTGTTAACGGGACTCGGCAAGAAATCAA TCTTTGCCAGAACTGTTATCAATTACTCAAGAAACAAGCAGGAGGAAATATGAATCCAACCAACGCATCCGATCCATTTG GGTTTGGAAGCTTAGATGATATTTTCCGTGCGATGAATCAGGGAATGGATCAACCGCAACAGCCAAACGCACAGGTTCCG CCTACCCAGGCAGGACGCGGCGGCAACAATGGCCGCAATGGCAACGGCGGTAAGGGCTTGTTAGGTCAGTTTGGTGTTGA TCTCACTGAACAGGCACGCAAAGGTCAAATTGATCCAGTCATCGGTCGTGATAAGGAAATCTCACGCGTGATTGAAATTC TGAATCGCCGGACCAAGAATAATCCAGTCTTAATCGGTGAAGCCGGGGTCGGCAAAACCGCGGTTGTTGAGGGACTGGCA CTAAAGATTGCTAATGGCGACGTTCCAGCCAAGTTGCAGGATCGCCATGTGATTCGCCTTGATGTCGTTTCACTCGTTCA AGGCACAGGCATTCGCGGTCAATTCGAGCAGCGCATGCAACAATTGATTGACGAACTGAAGCAAAATAAGAATATTATCC TATTTATTGATGAAATCCACGAAATTGTGGGTGCCGGCAATGCTGAAGGCGGAATGGACGCCGGCAACGTCTTGAAACCC GCTTTGGCTCGTGGCGAATTACAACTAGTCGGCGCGACGACCAGCAACGAATACCGTCAAATTGAAAAGGATTCTGCCCT AGCTCGGCGCCTTCAGCCGGTGATGGTTGAAGAGCCTAGCGTTGATGAAACCATTAAAATTCTGAAGGGTCTGCAACCGC GCTACCAAGACTTCCACCATGTGAAATACACGGAAGGCGCAATTGAAGCTGCGGCAACCCTCAGCAATCGTTACATTCAG GATCGCTTCCTCCCTGATAAAGCCATTGACTTGTTAGACGAAGCCGGTTCACGCAAGAACCTGACAATTGCCACCGTGGA TCCTGAAACCATTAAAGCTAAGATTGCTGATGCCGAAAAGCAAAAGCAAGCCGCACTCAAGCAGGAAGACTATGAAAAAG CCGCCTTCTATCGTGATCAGGTCACCAAGTTAGAAGACATGGCCAAAAAGCAATCCAATCTGCCAGATGATGAAATCCCA ACCGTTACCGAAAAAGACATGGAAAAAATTGTTGAAGAAAAGACAAACATTCCAGTCGGTGAACTCAAAGCTCAGGAACA GGCGCAACTGAAGAATCTCGCCAGTGACCTTGAGCAACACGTCATTGGTCAAAATGAAGCAGTTGATAAAGTTGCTCGGG CAATTCGGCGCAATCGCATCGGCTTCAATAAAACCGGGCGACCAATTGGCTCCTTCCTATTTGTCGGACCAACCGGTGTC GGCAAAACGGAACTGGCAAAACAGCTCGCTAAAGAACTATTCGGTTCTGAAGATGCCATGATTCGGTTTGACATGTCGGA ATACATGGAGAAGTTCAGCGTCTCTAAGCTCATCGGGTCACCGCCAGGCTATGTCGGCTATGAAGAAGCCGGCCAGCTAA CTGAAAAAGTTCGGCGCAATCCATACAGTTTGATTTTGCTTGATGAAATTGAAAAAGCCCACCCGGATGTCATGAACATG TTCCTGCAGATTCTGGATGACGGCCGCCTAACCGATTCACAAGGTCGAACTGTTTCCTTCAAAGATACTATCATCATCAT GACTTCTAACGCCGGATCAACTGATGCGGAAGCTAACGTAGGCTTTGGTGCAACGTTAAGCGGTAAAACCCACAGTGTGC TGGATCAGCTGGGTAATTACTTCAAACCAGAATTCCTGAATCGCTTTGATGACATTGTTGAATTCAAGCCGCTTTCTAAA GACGACCTATTGAAGATTGTGTCACTGATGATTAATGACACTAACAACAATCTCAAGAGTCAGGGATTAACGATTCATGT CACCGATCCCGTCAAGGAAAAGCTTGTCACTCTGGGTTACAATCCATCCATGGGGGCACGGCCATTGCGTCGGGTTATCC AGGAACAGATTGAAGACCGTGTGGCTGACTTTTACCTCGACCATCCTAATGCCAAGGAACTTGAAGCAAGGATCAGCAAC GGAGAAATCACAGTTGGCGAACCAGCCAAGGCAGAAGCCTCTTCAAAAACAGCCAAGAAATAA Protein sequence : MLCENCHKNPATIHLSTVVNGTRQEINLCQNCYQLLKKQAGGNMNPTNASDPFGFGSLDDIFRAMNQGMDQPQQPNAQVP PTQAGRGGNNGRNGNGGKGLLGQFGVDLTEQARKGQIDPVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLA LKIANGDVPAKLQDRHVIRLDVVSLVQGTGIRGQFEQRMQQLIDELKQNKNIILFIDEIHEIVGAGNAEGGMDAGNVLKP ALARGELQLVGATTSNEYRQIEKDSALARRLQPVMVEEPSVDETIKILKGLQPRYQDFHHVKYTEGAIEAAATLSNRYIQ DRFLPDKAIDLLDEAGSRKNLTIATVDPETIKAKIADAEKQKQAALKQEDYEKAAFYRDQVTKLEDMAKKQSNLPDDEIP TVTEKDMEKIVEEKTNIPVGELKAQEQAQLKNLASDLEQHVIGQNEAVDKVARAIRRNRIGFNKTGRPIGSFLFVGPTGV GKTELAKQLAKELFGSEDAMIRFDMSEYMEKFSVSKLIGSPPGYVGYEEAGQLTEKVRRNPYSLILLDEIEKAHPDVMNM FLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGSTDAEANVGFGATLSGKTHSVLDQLGNYFKPEFLNRFDDIVEFKPLSK DDLLKIVSLMINDTNNNLKSQGLTIHVTDPVKEKLVTLGYNPSMGARPLRRVIQEQIEDRVADFYLDHPNAKELEARISN GEITVGEPAKAEASSKTAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-157 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003171569.1 | ATP-dependent clp protease ATP-binding subunit | VFG0080 | Protein | 0.0 | 60 |
| clpE | YP_003171569.1 | ATP-dependent clp protease ATP-binding subunit | VFG0079 | Protein | 9e-156 | 52 |
