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Name : nrdE (LGG_01474) Accession : YP_003171220.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : - Position : 1478349 - 1480520 bp Length : 2172 bp Strand : + Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : ATGTCACTAAAAACCATTAGTCCGGATGAGGTTACTTATTACGCACTTAACAACGAGATTAACATTCCCGTTAACGACCA AATTCCGCTTAACAAAGATAAAGAAGCATTGCAGGCCTTTTTGACCGAAAATGTTGCACCCAATACCATGAAATTTGCTT CATTACAGGAGCGCTTAAAGTATCTGGTTGAACATCACTATTATGAAGCCGACTTTTTAAAGAAATATCAACCAGCCTTT TTGGAGAAGTTGAATCAGTTTCTCACTGCCCAGCATTTCCAATTTAAGTCGTTCATGGCTGCGTATAAATATTATGCTCA GTACGCGTTAAAAACCGATGACGGAACGCAATATCTTGAAGATTACAAAGATCGCGTTTTCGCTAATGCCCTTTTCTTTG CGGATGGTAACGAAGATTTGGCCGTTGACTTAGCCGATGAGATGATTCATCAGCGCTATCAGCCGGCTACCCCATCCTTC CTGAATGCAGGTCGGGCGCGGCGTGGTGAACTGGTCTCTTGTTTCCTGTTGCAAATCACCGATGACATGAATTCAATTGG CCGGGCAATCAACTCGGCTTTGGAACTTTCCCGTATCGGCGGCGGTGTCGGCTTGACACTGTCGAACCTGCGTGAAGCCG GTGCACCGATCAAGGGCATTGACGGTGCTGCCAGTGGTGTCTTGCCGGTCATGAAGTTGCTGGAAGATTCATTCTCCTAC AGTAACCAGCTGGGTCAGCGCCAAGGTGCCGGGGTTGTTTATTTGAACGTCTTCCATCCGGATATCATCAGCTTCCTAGG CGCTAAGAAGGAAAATGCCGATGAAAAGTATCGGGTGAAAACGTTGAGCCTTGGTGTGATTGTGCCAGATAAATACTACG AACTCATCAAGGCTAACGCTGACATGTACCTCTTCTCCCCTTATTCAGTCGAACGCGCGTATGGCAAGCCATTTTCTTAC GTGGATATCACGAAGGAATACGACAAGATGGTAGCCAATCCTGATATTAAGAAATACAAGATTAAAGCGCGCGACTTGGA AAACGAGATCTCCAAGTTGCAGCAAGAATCCGGCTATCCATACATCATTAATATCGATACAGCCAATCGTGCCAATCCGA TCGAAGGTAAGATTATCATGAGCAACCTGTGTTCTGAGATTATGCAGGTTCAGGTTCCGTCTAAGCTCAATAATCGTCAG GAGTACGAGGTCTTAGGGACAGATGTTTCATGCAACCTGGGGAGTACGAATATTCCTAACCTGATGCACAGCCGTGATTT TGGTCATAGCGTCGAAGCCATGGTACGCGCGCTCACTTATGTCACGGATCACAGCAACATTGACGTTGTGCCGTCCGTGC AGCACGGCAATCACCTTGCTCACAGCATTGGTCTTGGTGCGATGGGCCTGCATACCTATTTTGCCAAGAACCACATGTAT TATGGTTCACCGGAAAGCCTGGATTTCACTAACATCTACTTCCTACTGCTTAATTACTACACGCTCAAAGCTTCCAATAA GATCGCTAAGGAACGCGGCGAATCCTTCCACAACTTTGAAAATAGCAAGTACGCAGATGGCAGTTATTTTGACAAGTATC TCAATCAAACTTGGGCGCCGAAGTACGATAAAGTTCGCGACTTGTTCAAAAACATTCACATTCCAACGCAGGCTGATTGG CAGGCACTTAAAGAAGATGTGATGAAAAACGGTTTGTACCATCAAAACCGGATGGCAGTTGCACCTAATGGCTCAATTAG CTATATCAACGACACCAGCGCTTCATTGCAGCCAATTGTCAACCGGATTGAGGATCGTCAGGAAAAGAAAATCGGTACCA TTTATTACCCGGCACCGGGACTGTCCAATGATACGATGCCTTACTATCAAAGCGCCTATGACATTGATATGCGTAAAGTG ATCGATGTTTATGCCGCTGCGCAACAACATGTTGACCAAGGAATGGCGATGACGTTGTTTATGCGCAGTACCATCCCAGC CGGACTTTATCCGTGGAAAGATGGACGCACGAATAAAATGACTACCCGGGACTTGAACATCTTGCGGAATTACGCTCATT ATAAGGGCATTAAGTCCATTTACTACATCCGGACTTATACCGATGACCAAGAAGAAATCGGCAGCAACGCTTGTGAAAGT TGCTCAATTTGA Protein sequence : MSLKTISPDEVTYYALNNEINIPVNDQIPLNKDKEALQAFLTENVAPNTMKFASLQERLKYLVEHHYYEADFLKKYQPAF LEKLNQFLTAQHFQFKSFMAAYKYYAQYALKTDDGTQYLEDYKDRVFANALFFADGNEDLAVDLADEMIHQRYQPATPSF LNAGRARRGELVSCFLLQITDDMNSIGRAINSALELSRIGGGVGLTLSNLREAGAPIKGIDGAASGVLPVMKLLEDSFSY SNQLGQRQGAGVVYLNVFHPDIISFLGAKKENADEKYRVKTLSLGVIVPDKYYELIKANADMYLFSPYSVERAYGKPFSY VDITKEYDKMVANPDIKKYKIKARDLENEISKLQQESGYPYIINIDTANRANPIEGKIIMSNLCSEIMQVQVPSKLNNRQ EYEVLGTDVSCNLGSTNIPNLMHSRDFGHSVEAMVRALTYVTDHSNIDVVPSVQHGNHLAHSIGLGAMGLHTYFAKNHMY YGSPESLDFTNIYFLLLNYYTLKASNKIAKERGESFHNFENSKYADGSYFDKYLNQTWAPKYDKVRDLFKNIHIPTQADW QALKEDVMKNGLYHQNRMAVAPNGSISYINDTSASLQPIVNRIEDRQEKKIGTIYYPAPGLSNDTMPYYQSAYDIDMRKV IDVYAAAQQHVDQGMAMTLFMRSTIPAGLYPWKDGRTNKMTTRDLNILRNYAHYKGIKSIYYIRTYTDDQEEIGSNACES CSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 1e-177 | 53 |
