Gene Information

Name : xerD (LGG_01378)
Accession : YP_003171124.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_013198
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1381676 - 1382557 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGCATGGGTTGATTGCTGATTTTATTCATTATCTGGATGTTGAGCGCGGGCTGGCCCGAACAACGCAGGTCAGCTATCA
GCAGGATTTAACCACCTTTATGGCGTGGTTAAGCGACCAAAAGCAAACAACTTTTCCCGAAGATTTTGGGGTTATTCAGG
CGTTCTTAAAGCATCAAAATGATACCAAAGCGCCTGCATCAGTCAGTCGAATGATTTCGGCGTTACGCAAGTTTTACCGG
TTCTTGTTACGCGAAGGTGCCATTAAATCTGACCCGATGACCAAAATTGATACTCCGAAAAAAGCACAACATTTACCGGC
CACGTTATCAGGGACAGAAATTGATGCTTTGATGGCAAAGCCGGATACCACTAAGCCGTTGGGATTGCGTGATCGCGCTA
TTTTTGAGCTGATGTATGCGACTGGCTTGCGGGTATCGGAAGTTGTGGGATTGCGATTGGATCAGTTACATTTAGCAATG
AACTTGCTTCAGGTTACCGGAAAGGGCGATAAGGAGCGACTGGTTCCAATCAGTCCCCAAGCAGCCGATTGGGTTAACCG
TTATTTGCAGGAATCCCGTCCGCGTTTGATCAAACACCAGCAACCCAAGGCAGTGTTCGTCAACTTTCATGGTCATGCGC
TCACCCGTCAAGCAATTTGGAAGAATCTGAAAGCCTATATTGCAAGTGTTGGCATTGAAAAGGACGTAACACCGCATACG
TTACGGCACAGTTTTGCCACGCGCCTGTTGGAAAATGGCGCCGATTTACGGGTGGTTCAGGAGTTACTGGGGCATAGTGA
TATTAGTACCACCCAAATCTATACACATCTGAGTAATCAGCATCTAGTGGCGGTTTATCATAAAACCCATCCTCGTGGCT
AA

Protein sequence :
MHGLIADFIHYLDVERGLARTTQVSYQQDLTTFMAWLSDQKQTTFPEDFGVIQAFLKHQNDTKAPASVSRMISALRKFYR
FLLREGAIKSDPMTKIDTPKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAM
NLLQVTGKGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQAIWKNLKAYIASVGIEKDVTPHT
LRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLVAVYHKTHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-57 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-57 44