|
Name : xerD (LGG_01378) Accession : YP_003171124.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1381676 - 1382557 bp Length : 882 bp Strand : + Note : - DNA sequence : ATGCATGGGTTGATTGCTGATTTTATTCATTATCTGGATGTTGAGCGCGGGCTGGCCCGAACAACGCAGGTCAGCTATCA GCAGGATTTAACCACCTTTATGGCGTGGTTAAGCGACCAAAAGCAAACAACTTTTCCCGAAGATTTTGGGGTTATTCAGG CGTTCTTAAAGCATCAAAATGATACCAAAGCGCCTGCATCAGTCAGTCGAATGATTTCGGCGTTACGCAAGTTTTACCGG TTCTTGTTACGCGAAGGTGCCATTAAATCTGACCCGATGACCAAAATTGATACTCCGAAAAAAGCACAACATTTACCGGC CACGTTATCAGGGACAGAAATTGATGCTTTGATGGCAAAGCCGGATACCACTAAGCCGTTGGGATTGCGTGATCGCGCTA TTTTTGAGCTGATGTATGCGACTGGCTTGCGGGTATCGGAAGTTGTGGGATTGCGATTGGATCAGTTACATTTAGCAATG AACTTGCTTCAGGTTACCGGAAAGGGCGATAAGGAGCGACTGGTTCCAATCAGTCCCCAAGCAGCCGATTGGGTTAACCG TTATTTGCAGGAATCCCGTCCGCGTTTGATCAAACACCAGCAACCCAAGGCAGTGTTCGTCAACTTTCATGGTCATGCGC TCACCCGTCAAGCAATTTGGAAGAATCTGAAAGCCTATATTGCAAGTGTTGGCATTGAAAAGGACGTAACACCGCATACG TTACGGCACAGTTTTGCCACGCGCCTGTTGGAAAATGGCGCCGATTTACGGGTGGTTCAGGAGTTACTGGGGCATAGTGA TATTAGTACCACCCAAATCTATACACATCTGAGTAATCAGCATCTAGTGGCGGTTTATCATAAAACCCATCCTCGTGGCT AA Protein sequence : MHGLIADFIHYLDVERGLARTTQVSYQQDLTTFMAWLSDQKQTTFPEDFGVIQAFLKHQNDTKAPASVSRMISALRKFYR FLLREGAIKSDPMTKIDTPKKAQHLPATLSGTEIDALMAKPDTTKPLGLRDRAIFELMYATGLRVSEVVGLRLDQLHLAM NLLQVTGKGDKERLVPISPQAADWVNRYLQESRPRLIKHQQPKAVFVNFHGHALTRQAIWKNLKAYIASVGIEKDVTPHT LRHSFATRLLENGADLRVVQELLGHSDISTTQIYTHLSNQHLVAVYHKTHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-57 | 44 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-57 | 44 |
