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Name : pdhD (LGG_01323) Accession : YP_003171069.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1320182 - 1321585 bp Length : 1404 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTTGTAGGCGATTTTGCAATCGATTTGGACACCGTTGTGATTGGCTCTGGCTCAGGTGGTTACGTAGCTGCGATCCG AGCAGCCGAAATGGGTCAGAAGGTAACTGTTATCGAGAATACCTTCATTGGCGGGGTTTGTTTGAATGTTGGCTGTATCC CATCAAAAGCTTTGATCAATGCCGGTCACCGTTATCAAGATGCCTTGGAAGCAAGCACGTTTGGTATTAATGCCAAGGGC GCGGATCTTGATTTCAAAAAAACCCAGGATTGGAAGCAAAACAAGGTTGTGCACACGTTAACCAGCGGTGTTGCGATGCT TTTAAAAAAGCACAAAATCGAAACCATCATGGGGACGGCTTTCTTGAAAGATGATCATAGTCTGCGGGTTATGCAAAAAG ACTCGGCTCAGACATACACCTTCAAGAATTTGATCATTGCAACCGGAAGCCGGCCAATTGAAATCAAAGGCTTCAAATTT GGCAAACGGATTTTGGATTCAACCGGTGGCCTAAACTTACCGGAAGTACCAAAAGAATTCGTGGTGATTGGCGGTGGCTA CATCGGATCCGAACTGGCGAGCGCCTATGCCAACTTAGGCGCACATGTCACAATTCTTGAAGGCACCAGCTCAATTTTGC CAAACTTTGAAAAGGATATGGTTCAACTCGTCTTGAACTCCTTTAAAAAGCGCGGCGTTACAGTGATTACCAACGCGATG GCGAAGGAAGCCGAAGATACCGGCAATGGCGTCAAGGTAACCTATACAGCGGACGGTAAAGAACAAACCATTGCCGCAGA TTATGTGATGGTCACAGTCGGGCGGCGGCCAAATACCGATGATTTGGGCTTAGACATTGTTGGCATTGAAACAACGGATC GCGGCTTGATCAAAGTCGATGCGCAAGGACGAACCAATAAGCCTAATATTTTTGCAATCGGTGACATTGTTCCCGGTGCT GCATTAGCGCATAAAGCAAGTTACGAAGGTAAGATAGCGGCTGAGGCGATCAGTGGCAAGGCAAGCGCGGTTGACTATAA AGCAATGCCGGCTGTTTGTTTCACGGATCCAGAACTGGCTACAACTGGCATGACGCTTGCTGAGGCCAAGGATAAAGGCA TTAAAGCTAAAGCAAGCAAGTTTCCATTTGCGGCGAATGGCCGTGCTTTAAGTTTGGCGCAAACCGAGGGCTTCGTTCGT CTGGTTACGGATGAAAACGGAACCGTCATCGGTGGTCAAGTTGCTGGTGCCGGTGCCAGTGATTTGATCTCAGAATTAAC GGTCGCGGTTGAAGGTGGACTTAACGCTGAAGATTTGGCTTTGACCATCCATCCACATCCGACCTTAAGTGAAACCATTA TGGATGATGCTGAAGTTGCATTAGGGTTGCCAATTAATATCTAG Protein sequence : MVVGDFAIDLDTVVIGSGSGGYVAAIRAAEMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRYQDALEASTFGINAKG ADLDFKKTQDWKQNKVVHTLTSGVAMLLKKHKIETIMGTAFLKDDHSLRVMQKDSAQTYTFKNLIIATGSRPIEIKGFKF GKRILDSTGGLNLPEVPKEFVVIGGGYIGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAM AKEAEDTGNGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGIETTDRGLIKVDAQGRTNKPNIFAIGDIVPGA ALAHKASYEGKIAAEAISGKASAVDYKAMPAVCFTDPELATTGMTLAEAKDKGIKAKASKFPFAANGRALSLAQTEGFVR LVTDENGTVIGGQVAGAGASDLISELTVAVEGGLNAEDLALTIHPHPTLSETIMDDAEVALGLPINI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 2e-103 | 48 |
