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Name : tex (LGG_01249) Accession : YP_003170995.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1242401 - 1244578 bp Length : 2178 bp Strand : + Note : - DNA sequence : TTGATTGAAGACCAAACCATTCAAATCGTACAACAAGACTTGACGGGAATGACGAGCCGGCAAATCAGTACGGTTTTGAA TTTGATGAATGAAGGCAATACGGTTCCGTTTATTGCGCGGTATCGTAAAGAAATGACCGGGAGTCTGGATGAAGTTCAGA TTCAGGCGATTGAGGAAGCCTATAAACGGGTGACGGCGCTGCAGGATCGTAAAGCTGCGGTGATCAAGAGTATTGCCGAA CAAGGGGCGCTGATGCCTGAGCTGGAGCAGCAAATCCGTGCTAGTACCAAGTTGCAGGATGTTGAGGATATTTATTTACC TTATAAGCAGAAGCGTCAGACCAAGGCAACCATTGCTAAAGCGCGCGGACTTGAACCTTTTGCGCAGTGGATTCTTTCTT TCCCAGTAGGCGATTTGACGTCTGAAGCGGCTAAATTTGTGAATCCGGACAAAGAGGTTGCGACTGAGCAGGACGTATTG GACGGTGCCCATGAAATTCTTGCGGAGAAGTTTAGCGAAATGGCGCCGATCCGCAATTGGGTGCGCAATTTCACCATGCG TACCGGTACGATTAAAACGACCGTCAAAACCAAAGGCAAGGAACTGGACGAAAAAGGCGTTTATCAGCAATTTTACGACT TTGAAGAGACCGTTAAGAAAATGTCATCGACTCGGACGCTGGCCATTAATCGCGGCGAAAAAGAGAAGATTTTGACAGTT AAGGTTCAAGTTGACCCCGCTTCGGTGATGCAGTATTGCCATTTTAAATTGATTGATAATCGCCCAAGTACCGAAGCAAC AGCGTTTATTGAAGCGGCATATCAGGATGCCTACAGACGCTTCATTGGCCCGGCGATTGAACGGGAAGTGCGCAATACTT TAACCGAAAGTGCTGAGGAGCAGTCGATTAAAGTCTTTGGTCAGAATCTGTACAACTTGCTGATGCAGGCACCGATTAAA GGCAAGGTGGTTCTCGGATTTGATCCGGCTTACCGCACCGGCTGCAAGCTAGCCGTGGTGGACGAAAATGGTAAGTTTTT GGACAAAGCTGTCATTTATCCGCACAAACCGGCGCCAGAGAAGAAGCGTCAGGCCGCGGCTTCGGAACTGATTGCGCTAC TCGAAAAATATCATGTGACGATGATTGCGATCGGCAACGGAACAGCAGGTCGGGAATCGGAACAATTTGTGGCGGAAACG CTCAAGCAGATTAAGCGGGATATTTATTATGTCATCGTCAACGAAGCTGGGGCATCGGTATATTCAGCCAGTCAAGAGGC GCGGGATGAGTTCCCGGACCTGCATGTCGAACAGCGCAGCGCAATCAGCATTGCTCGCCGCCTGCAGGATCCACTGGCGG AATTAGTGAAGATTGATCCGGAATCGATTGGTGTGGGGCAGTATCAGCACGATTTACCCGCCAAGGCGCTGGCAAGTGAA GTCGATGCAGTCGTGGAACGCGCGGTCAATCAGGTTGGCGTTAACCTGAACACAGCTAGTTACCAACTGTTAACCCACAT TTCCGGATTGTCAAAAACGATTGCGACTAACATTGTGAAATACCGCGATGAAAATGGCCGCTATAACAGCCGTGCCGAAT TGAAAAAAGTGCCGCGGCTGGGGCCAAAATCATTTGAACAGTCAGTTGGTTTTCTGCGAATCATTGGCGGTAAGCAGCCA CTTGATAACACCGATATTCACCCGGAAAGTTACCCTGTTGCCAAAAAGATTCTGGCTGCGGCGGGGTTATCCACGGCTGA TTTAGGTGATCATGAAGTAATTGCCAAGGTTGCTAGTGTTGATGTGGCCCCATTTGTCAACGATGGTGTTGGCGTTGAGA CAGTGCATGACATCATTAGCAGCCTGCAAAATCCCGGTCGCGATCTTCGTGAGAACATGGCAGCACCGCTTCTTCGGCAA GATGTCCTCACCATGGAAGACCTGAAGCCGGGCATGAAGCTGGAAGGAACTGTCCGCAATGTTGTAGATTTCGGCGCGTT TGTCGACATTGGCGTTAAGCACGACGGTTTAGTTCATGTCTCTAAAATGACCCGCAAGTTTGTCCGCGATCCTAAAACGG TTGTGGCAGTCGGTGATATTGTGACGGTCTGGATTGAATCGGTGGATCTCAATCGCGAGCGGATACAGCTGACGATGATC GCGCCGACTGTTGGTTAA Protein sequence : MIEDQTIQIVQQDLTGMTSRQISTVLNLMNEGNTVPFIARYRKEMTGSLDEVQIQAIEEAYKRVTALQDRKAAVIKSIAE QGALMPELEQQIRASTKLQDVEDIYLPYKQKRQTKATIAKARGLEPFAQWILSFPVGDLTSEAAKFVNPDKEVATEQDVL DGAHEILAEKFSEMAPIRNWVRNFTMRTGTIKTTVKTKGKELDEKGVYQQFYDFEETVKKMSSTRTLAINRGEKEKILTV KVQVDPASVMQYCHFKLIDNRPSTEATAFIEAAYQDAYRRFIGPAIEREVRNTLTESAEEQSIKVFGQNLYNLLMQAPIK GKVVLGFDPAYRTGCKLAVVDENGKFLDKAVIYPHKPAPEKKRQAAASELIALLEKYHVTMIAIGNGTAGRESEQFVAET LKQIKRDIYYVIVNEAGASVYSASQEARDEFPDLHVEQRSAISIARRLQDPLAELVKIDPESIGVGQYQHDLPAKALASE VDAVVERAVNQVGVNLNTASYQLLTHISGLSKTIATNIVKYRDENGRYNSRAELKKVPRLGPKSFEQSVGFLRIIGGKQP LDNTDIHPESYPVAKKILAAAGLSTADLGDHEVIAKVASVDVAPFVNDGVGVETVHDIISSLQNPGRDLRENMAAPLLRQ DVLTMEDLKPGMKLEGTVRNVVDFGAFVDIGVKHDGLVHVSKMTRKFVRDPKTVVAVGDIVTVWIESVDLNRERIQLTMI APTVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 7e-136 | 45 |
