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Name : dapE (LGG_01194) Accession : YP_003170940.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : succinyl diaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 1185409 - 1186533 bp Length : 1125 bp Strand : - Note : - DNA sequence : ATGACAGATCCCATTGCGTTTTTGCAAAAACTAATCCAAATTGACTCTGCAAATGGAAACGAACTTGCAGTAGCCCGCGT TTTGCAAGCTGAACTCGAAGCGGCCGATATTCCAACCAAATTGATCCCATACAAAGATGATCGGGTCAATTTAGTCGCCC AGCTCAATCACGGTGACCGCGTATTAGGCTTCACCGGCCATGAAGACGTGGTGAGTCCCGGCGATGAGAACGCCTGGACC TATCCGCCTTTTTCCGGAAAGATCGTGAACAACACCATGTACGGTCGCGGCACCGATGATATGAAAAGTGGGCTAGCAGC CATGACCTTGGCACTGATCCACCTTAAGCAAAGCGGCTTTGCCCATCCGCTGCGTTTCATGGCCACGGTCGGTGAAGAGT TTGGTGCAATGGGAGCGCGCCAACTCACCGAACAAGGTTATGCCGATGACTTAGCCGGACTCGTGGTAGGCGAACCAACG AACAAATTGCTAAAATACGCACACGGCGGAACGGTTAACTACGAAATTGACAGCGAAGGCGTTTCCGTCCACAGCTCCCG GCCGGAAAAAGGCGTTAACGCAATTGAAGGGTTGGTGGCATTTTCTACTCGCGAACCGCACGCCTTTGATCAGGCCCCTG ATGATCCTGACCTTGGTCCATTCCGCCACTCCATTACCGTGATCAAAGGCGGCGATCAAGTCAACACCATTCCTGCCCAT GCATACTTACGCGGCAACTTGCGCCCGACTCCTGCAGCAAATATCGAATTAGTCGTCGGGTTATTGGAAAAATTAGTCGA TCAGGCAAATAAAGCCACCGCCGCTAACTTGACGTTGAACGTTTTACATCGTTTTTTGCCGGTACACTCTGACAAAAACG GGCATCTCGTGACAACCGCTAACGAAGCCATTGCCGCTGTGACTGGTAAGCCAGCCGAGTTAGCGGTGGCTTTTGGCGGA ACCGACGCGTCAGAATTCATCCGTTCCGATAACCAGTTTGACGTGATTGTCTATGGTCCCGGCGATAATCATTTCAGTCA TCAGATTGACGAACATGTTGATTTAGATAGCTACACGACAGCGATTAAAACTTACGAAGAAATTGCCAAACGCTTTTTTG CCTGA Protein sequence : MTDPIAFLQKLIQIDSANGNELAVARVLQAELEAADIPTKLIPYKDDRVNLVAQLNHGDRVLGFTGHEDVVSPGDENAWT YPPFSGKIVNNTMYGRGTDDMKSGLAAMTLALIHLKQSGFAHPLRFMATVGEEFGAMGARQLTEQGYADDLAGLVVGEPT NKLLKYAHGGTVNYEIDSEGVSVHSSRPEKGVNAIEGLVAFSTREPHAFDQAPDDPDLGPFRHSITVIKGGDQVNTIPAH AYLRGNLRPTPAANIELVVGLLEKLVDQANKATAANLTLNVLHRFLPVHSDKNGHLVTTANEAIAAVTGKPAELAVAFGG TDASEFIRSDNQFDVIVYGPGDNHFSHQIDEHVDLDSYTTAIKTYEEIAKRFFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 5e-63 | 42 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 1e-63 | 42 |
