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Name : LGG_00978 (LGG_00978) Accession : YP_003170724.1 Strain : Lactobacillus rhamnosus GG Genome accession: NC_013198 Putative virulence/resistance : Unknown Product : multidrug ABC transporter permease Function : - COG functional category : V : Defense mechanisms COG ID : COG0842 EC number : - Position : 988866 - 990005 bp Length : 1140 bp Strand : - Note : - DNA sequence : ATGCGCACTGAAGCTTTGATGATACGAATTTTCAAGGAAATGTTACGCGACAAACGCACTCTGGCCTTAATGTTTATCGC GCCTTTGTTTATCATGACGTTAATCTTCTTCTTATTTCAATCCAACACAACGACAAAGGTTGATTTGGCCGTGCATGGCG TCCAAACATCCTTAACCAAGACGATGGATACGAAGCATGTAAGATTACATCACGTTGGCACTGAAAAACCTACCCGCATA ATCAAACAGCATGATTATGCAGGCGTTTTAACGCAACATGGCGATCAGCTTACGTTAACGCTTGCCAACACCGATCAGGG ACAAAGCACGCTGTTGAAGCAAACATTACAGGCTGCCACCGTTAAGTTAAGACTAAAAGCTGCGGCCACCAGCCTTAAAA CACAAGCGATTGCCTTAAATAAACTGGCGGGCGCGTTACAACAAGCCACGCACGGTGCGGTACAAGTCCCCATCCCGCAA CAACCCAAGCAGACCAATTATCGCATGACAACCCACTATCGCTACGGGTCGGCTGAATCCACTTACTTTGATACTTTGTT ACCGATTCTTATTGGCTTTATCGTCTTCTTCTTTGTCTTTTTGATTTCCGGCATTGCCTTACTGCGCGAACGGACAACTG GAACGCTTTATCGCTTGCTGGCGACTCCGATTCGTCGCGGTGAAATCATCAGTGGGTACCTACTTGGTTACGGGATCTTT GCGGTCATTCAAACGGTTTTGATTGTCGGCTATGCCTTGGTGGTCTTTAAGATCCAAATTCTTGGCAGCATTCCGGCCAT TTTTCTAATCAATTTACTGCTGGCATTAACAGCACTTGCGCTTGGCTTGCTCATTTCAACCTTTGCCAACAGTGAGTTTC AGATGTTGCAGTTTATTCCTATTATTGTGATCCCCCAGATTTTTTTCACCGGATTGATTCCTGTCAATCAGATGCTTGGA TGGCTGCAACCCATTGCGCATTTAATGCCACTTTATTATGGTGCCAATGCGTTAACCGGAATTATTACCAAAGGCCAATC ACTAGCAGTTTTATACCCTGATGTCATTGCATTAGTAGGCTTTTTCCTGCTATTTTTAGGCCTGAATCTTTTGACAATGC GCAAATATCGTCAAGTCTGA Protein sequence : MRTEALMIRIFKEMLRDKRTLALMFIAPLFIMTLIFFLFQSNTTTKVDLAVHGVQTSLTKTMDTKHVRLHHVGTEKPTRI IKQHDYAGVLTQHGDQLTLTLANTDQGQSTLLKQTLQAATVKLRLKAAATSLKTQAIALNKLAGALQQATHGAVQVPIPQ QPKQTNYRMTTHYRYGSAESTYFDTLLPILIGFIVFFFVFLISGIALLRERTTGTLYRLLATPIRRGEIISGYLLGYGIF AVIQTVLIVGYALVVFKIQILGSIPAIFLINLLLALTALALGLLISTFANSEFQMLQFIPIIVIPQIFFTGLIPVNQMLG WLQPIAHLMPLYYGANALTGIITKGQSLAVLYPDVIALVGFFLLFLGLNLLTMRKYRQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0082 | YP_251997.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-43 | 44 |
| SE0095 | NP_763650.1 | hypothetical protein | Not tested | SCCpbp4 | Protein | 2e-43 | 43 |
| SH2614 | YP_254529.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 2e-44 | 41 |
