Gene Information

Name : ssb1 (LGG_00010)
Accession : YP_003169756.1
Strain : Lactobacillus rhamnosus GG
Genome accession: NC_013198
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 11006 - 11437 bp
Length : 432 bp
Strand : +
Note : -

DNA sequence :
ATGTTAAACAATGTGAGTTTAACCGGCCGTCTGACGAAGGAACCAGAAGTGTTTAAAACTGCTGCTGATTTGGAACTAGT
ACGCTTTACGTTAGCGGTGGATCGGGTTTTTAAAAGTAAAACCGGACAACGGGAAACCGATTTTATTGAGTGCGTGATCT
TTGGCAAACGCGCACTGACATTTGCCAGCTCGACAACAAAAGGCTCGTTGATCGGGATTGCCGGCCGAATCAGCAATAAT
CATTTCGAGAATAAACAAGGCGAACAGCAGTGGCGGACTTCGGTAGTCGTCGATAATTTTGCCTGGCTGGAGTCGCGTGC
CATGACCGAGAGTCGGCGTAGTGGCTCCATGCAAGCGACCGGAACTGACGGTATGCCACCGGGGGCACCAGCTGAACCGG
CAGAAATTGCTACGGATGATTTACCGTTTTAG

Protein sequence :
MLNNVSLTGRLTKEPEVFKTAADLELVRFTLAVDRVFKSKTGQRETDFIECVIFGKRALTFASSTTKGSLIGIAGRISNN
HFENKQGEQQWRTSVVVDNFAWLESRAMTESRRSGSMQATGTDGMPPGAPAEPAEIATDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 6e-19 50
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-21 47
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 3e-21 47
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 9e-18 44
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 9e-18 44
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-18 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 4e-17 43
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-17 43