Gene Information

Name : CAP2UW1_0092 (CAP2UW1_0092)
Accession : YP_003165389.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 105978 - 107375 bp
Length : 1398 bp
Strand : +
Note : PFAM: transposase IS66; KEGG: eba:ebA5523 transposase

DNA sequence :
ATGAAATTCGGCGTCAAGAGCGAATCCCTGGCCGCCGGCTCACGGGGCCTCTTCGACGAAACCCTGGCCGCCGATCTCGC
CGCCTGCGAAGCCCGTTTGGCCGAAAAGCGTCAAGCGGCCGAAATGGGGCCGCCGCTCCCTCCCCCCGAAAAGCCCAAAC
GCGAACGCGCCGGCCGTCAGCCCTTGCCCGACCAGTTGCCCCGTGTCGAGCACCTGCACGAGCCCAATACCTGCACCTGT
GGTCGGTGTGGTCAGGCACTGGTGCGGATCGGTGAGGACGTGACCGAGAAGCTGAGCATCGTCCCTGCCGAGTTCTTCGT
CGAACGCCATATCTACCCGAAGTACGCCTGCCGGCCTTGCGAGACCCTCACCGCCGCACCGGCTGTGGCGTCGATCATCG
ACGGTGGGTTGGCGGCACCGGCCTTGCTGGCCTGGGTAATGGTCAGCAAGTACGCCGATCACCTGCCGCTCTACCGTCTC
GAACGGCAGGCCGCTCGCGCGGGGGTGACGCTGTCCCGTTCGACGCTGGCCGACTGGGTCGGGCGCACCGGTGTCGCCCT
GGAGCCGCTCTGGCAGCGCCTCGCCGAAGTGCTCCGCCAGGGGACGGTGCTGCATGCCGATGAAACGCCGGTGCAGCAAC
TCGATCCGGGCCGGGGAAAGACCAAACGAGCGTATCTCTGGGCGTATCGCAGCAATGCCTTGGCGGGCGATCCGTCGATC
GTCGTCTTCGACTACCAGCCTGGCCGCGGCGGAAAGTATGTGGCGGCGTTCCTCCGCGACTGGCAAGGGGCTCTGATGGT
TGATGACTTCGCCGGTTACGATGCCCTGTTTCGTGGCCACGTGATCGAACTCGCCTGTCTGACCCACGCGCGACGGAAGT
TCTTCGACCTCCATCAGGCCAATGGGAGCCCCGTCGCGGCCGAAGCCCTGGACCGCTTCGCCGCGTTGTATGCGATCGAG
GCCACGGCGAAGGGAAAGACGGTAGAGGAGCGGGCTCGGCGACGGAAAGAGACGAGTCAACCTCTGCTCGACGCTCTGCA
TCTGTGGCTCCTGAGCACCCGCACGACGGTGGCTCACGGAAGCGCTCTGGCCAAGGCGATCGACTACAGTCTGCGACGCT
GGCCGGCCATTGCCCGTTACGTCACGAACGGTTTCTACCCGATCGACAACAACCCCGTCGAGAATGCCATTCGCCCGATC
GCCATCGGCAAGAAGAATTGGCTGTTCGCCGGTTCCGAGGCGGCCGGCCAGCGCGCCGCGGCTATTCAATCGCTACTCGA
AACCGCGCGCCTGAACGGCATCGAGCCCATGGCCTGGCTGATCGACACCCTCGAGAAACTCCCCTCCTGGCCCAACAGCC
GCATCGACGAGTTGTTGCCGCTCAAAAAACGAGAGTGA

Protein sequence :
MKFGVKSESLAAGSRGLFDETLAADLAACEARLAEKRQAAEMGPPLPPPEKPKRERAGRQPLPDQLPRVEHLHEPNTCTC
GRCGQALVRIGEDVTEKLSIVPAEFFVERHIYPKYACRPCETLTAAPAVASIIDGGLAAPALLAWVMVSKYADHLPLYRL
ERQAARAGVTLSRSTLADWVGRTGVALEPLWQRLAEVLRQGTVLHADETPVQQLDPGRGKTKRAYLWAYRSNALAGDPSI
VVFDYQPGRGGKYVAAFLRDWQGALMVDDFAGYDALFRGHVIELACLTHARRKFFDLHQANGSPVAAEALDRFAALYAIE
ATAKGKTVEERARRRKETSQPLLDALHLWLLSTRTTVAHGSALAKAIDYSLRRWPAIARYVTNGFYPIDNNPVENAIRPI
AIGKKNWLFAGSEAAGQRAAAIQSLLETARLNGIEPMAWLIDTLEKLPSWPNSRIDELLPLKKRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB16 ABD94703.1 ISPpu14 transposase Orf3 Not tested ExoU island B Protein 1e-79 54
RL059 AAP84184.1 transposase Not tested PAPI-1 Protein 2e-92 52
tnpC AEZ06051.1 transposase Not tested Tn6167 Protein 8e-86 50
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-66 43
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-66 43
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-58 42
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 3e-57 42
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 5e-67 42
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-67 42
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 5e-67 41
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-67 41
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-67 41
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-67 41
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-67 41
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-67 41
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-67 41
tnp AEA34686.1 transposase Not tested Not named Protein 3e-68 41
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 9e-67 41
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 9e-67 41
unnamed AAL57570.1 unknown Not tested LEE Protein 7e-68 41
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-66 41
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-66 41
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 3e-61 41
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 3e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_0092 YP_003165389.1 transposase IS66 VFG1700 Protein 2e-58 42
CAP2UW1_0092 YP_003165389.1 transposase IS66 VFG1513 Protein 2e-57 42
CAP2UW1_0092 YP_003165389.1 transposase IS66 VFG0793 Protein 8e-68 41