Gene Information

Name : CAP2UW1_0527 (CAP2UW1_0527)
Accession : YP_003165807.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 639402 - 640187 bp
Length : 786 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:p2A369 transposase/IS protein

DNA sequence :
ATGAACCTCCAGTACGAACGAATGCTCGCCTTGTGCGACAGTCTGAACCTGCCGTTCGTGGCGCAGAACTACGTCGGCGC
CGCCCAGGAAGCCGCTGCGCAGGAAAGCGCCTACAGCGACTTTCTGGAAGCACTGCTGAAAGCGGAAGTCGCGGGACGCC
AGGTGCGCAAGCAAAGCATGTTGACGCGTCTGGCGGGATTCCCGGCGATCAAGACGCTGGAGGAATTCGATTACGCCTTC
GCCGCCGGCGTCAAAAGGAGCCAGATCGACGAACTGGCCGGTCTGGCCTTTGTCGAGCGCAACGAAAACGTCGTCCTGGT
CGGCCCCTCCGGGGTGGGCAAGACCCATCTCGCGATCGCCCTGGGCTATCGCGCCGCGCAAGCCGGCATCAAGACCCGTT
TCACGACCGCCGCCGATCTCTTGCTGACCCTCTCGGCCGCGCACGCACAGAACCAGTTGAAAGCGGTCATGCACCGGGCG
ATCGCCGCTTACCGTCTGCTGATCATCGACGAAATCGGCTATCTGCCGATGAGCCGCGAGCAGGCCAACCTCTTTTTCCA
GGTGATTGCCGCGCGCTACGAGAAGGGCAGCCTGATCGTCACCAGCAACCTGTCGTTTGGCCAATGGGATGCCACCTTTG
CGCAGGATGCCACGCTGACGGCGGCATTGCTGGATCGTTTGCTGCACCACGCACAGATCGTACCGATCGCCGGGGAAAGC
TACCGGCTCAAACGTCAGCGGCAGACGGGAATGGTTCAGGCCAGGAAGGCGATCGCCGGAGGGTAG

Protein sequence :
MNLQYERMLALCDSLNLPFVAQNYVGAAQEAAAQESAYSDFLEALLKAEVAGRQVRKQSMLTRLAGFPAIKTLEEFDYAF
AAGVKRSQIDELAGLAFVERNENVVLVGPSGVGKTHLAIALGYRAAQAGIKTRFTTAADLLLTLSAAHAQNQLKAVMHRA
IAAYRLLIIDEIGYLPMSREQANLFFQVIAARYEKGSLIVTSNLSFGQWDATFAQDATLTAALLDRLLHHAQIVPIAGES
YRLKRQRQTGMVQARKAIAGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-43 65
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-54 59
unnamed CAA21402.1 - Not tested HPI Protein 5e-54 59
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-54 59
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 5e-54 59
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-54 59
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-54 59
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-54 59
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-54 59
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-54 59
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-54 59
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-54 59
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 6e-54 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_0527 YP_003165807.1 transposase/IS protein VFG1460 Protein 7e-44 65
CAP2UW1_0527 YP_003165807.1 transposase/IS protein VFG1606 Protein 2e-54 59
CAP2UW1_0527 YP_003165807.1 transposase/IS protein VFG1663 Protein 3e-54 59
CAP2UW1_0527 YP_003165807.1 transposase/IS protein VFG1515 Protein 2e-54 59
CAP2UW1_0527 YP_003165807.1 transposase/IS protein VFG1627 Protein 2e-54 59