Gene Information

Name : CAP2UW1_4288 (CAP2UW1_4288)
Accession : YP_003169453.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4880943 - 4881668 bp
Length : 726 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_3462 ABC transporter related

DNA sequence :
ATGGGCGCCGCGCTGATCGAGCTTTCCGGCATCGAACGCGTTTTCCAGCTCGGCGACAGCGAGGTACACGCGCTGCGCCG
GCTCGACGTCTCGATCAGCGCCGGCGAGTATGTCGCCGTGATGGGCCCGTCGGGGTCGGGCAAGTCGACGCTGCTCAACC
TCCTCGGCCTGCTCGATCGCCCCAACGCCGGCGTCTATCGCCTCGAGGGACGCGACGTCACCACGCTCTCGGCCGAAGAG
CAGGCGCGCGTGCGCAGCGAGCGCATTGGCTTCGTCTTCCAGAGCTTCCACCTGGTGCCGCGGCTGACTGCCGCCGAAAA
CATCGCGCTGCCGATGATCCTGGCCGGCATCGCACCGGCGCAGCGCAGCGCACGCGTCGCGCGGGCGCTTGCCGACTACG
GGCTCGAAAACCGCGCCGACCATCGTCCGGACCAGCTCTCCGGCGGCCAGCGCCAGCGCGTCGCCATCGCCCGGGCGACG
ATCATGCAACCGGCATTGATCCTCGCTGACGAGCCGACTGGCAACCTCGACCGTGCCACCGGCGAGGAAGTGATGCGCCT
GCTCGAAGAACTCAACGCGCGCGGTGTGACGCTGATCGTCGTCACGCACGACGGCGGCCTCGGCGCACGCGCACGCCGCC
AGTTGCTGATGGAGGACGGCGCGCTGCACCACGACCATTGGCGCCCTGCTGATACGACGCCGGATCGATGCGCACTCCCG
ACCTGA

Protein sequence :
MGAALIELSGIERVFQLGDSEVHALRRLDVSISAGEYVAVMGPSGSGKSTLLNLLGLLDRPNAGVYRLEGRDVTTLSAEE
QARVRSERIGFVFQSFHLVPRLTAAENIALPMILAGIAPAQRSARVARALADYGLENRADHRPDQLSGGQRQRVAIARAT
IMQPALILADEPTGNLDRATGEEVMRLLEELNARGVTLIVVTHDGGLGARARRQLLMEDGALHHDHWRPADTTPDRCALP
T

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_4288 YP_003169453.1 ABC transporter NC_008702.1.4606598. Protein 7e-75 78
CAP2UW1_4288 YP_003169453.1 ABC transporter NC_012469.1.7686878. Protein 2e-44 48
CAP2UW1_4288 YP_003169453.1 ABC transporter CP001581.1.gene598.p Protein 5e-26 44
CAP2UW1_4288 YP_003169453.1 ABC transporter CP001581.1.gene798.p Protein 6e-30 42