Gene Information

Name : CAP2UW1_0401 (CAP2UW1_0401)
Accession : YP_003165683.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 472964 - 473644 bp
Length : 681 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_0429 response regulator receiver:transcriptional regulatory protein, C-terminal

DNA sequence : 
ATGCGCATCCTTCTCGCTGAAGACGACAGGATCATTGCCGATGGTCTGTGCCGTTCCTTGCGGCAGGCCGGCTACGCGAT
CGATTGTGCCTACAACGGACTCGATGCCGACACGGCTTTGATGACCAACACCTACGATCTCGTCATCCTCGATCTGGGCC
TGCCGAAACTGCCCGGGCTTGACGTGCTGCGTCGCTTGCGGGCTCGGAATTCGAGCACTCCGATCCTGATCCTGACGGCA
CTCGACGGTACCGACGATCGGGTGAAGGGGCTGGATCTCGGTGCCGACGACTACATGGCCAAACCCTTTGAACTCGCCGA
ACTCGAGGCGCGCGTGCGCGCCCTGAGCCGTCGCTCGTCGGGAACCTCACGGATGATCCAGTGCGGCTCACTGACCTTCG
ATCAGACCGATCGCTGCGCCCTCGTCAATGGCGAAATGCTCGATCTCTCGGCGCGCGAACTGGGCCTGCTCGAGATCCTC
CTGCTGCGCGCCAAACGTTTGGTCAGCAAGGACCAGTTGGTGGATCACCTGTGCGGGTGGGGCGAGGAGGTCAGTCACAA
CGCCATAGAGGTCTACGTCCACCGTCTGCGCAAGAAGCTCGAAGCGACCGGCGTCAATATCATCACCGTGCGTGGCCTCG
GCTATTACCTTGAGAAACCTGCGGAAGAGACAAAGTCCTGA

Protein sequence : 
MRILLAEDDRIIADGLCRSLRQAGYAIDCAYNGLDADTALMTNTYDLVILDLGLPKLPGLDVLRRLRARNSSTPILILTA
LDGTDDRVKGLDLGADDYMAKPFELAELEARVRALSRRSSGTSRMIQCGSLTFDQTDRCALVNGEMLDLSARELGLLEIL
LLRAKRLVSKDQLVDHLCGWGEEVSHNAIEVYVHRLRKKLEATGVNIITVRGLGYYLEKPAEETKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-24 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator BAC0487 Protein 7e-26 44
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator BAC0083 Protein 2e-23 43
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 1e-19 43
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-21 42
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator VFG0473 Protein 3e-23 41
CAP2UW1_0401 YP_003165683.1 winged helix family two component transcriptional regulator VFG1390 Protein 9e-20 41