Gene Information

Name : CAP2UW1_0386 (CAP2UW1_0386)
Accession : YP_003165668.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 461168 - 461932 bp
Length : 765 bp
Strand : -
Note : KEGG: dar:Daro_3206 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence :
ATGCGCTTCAAGGTCGTCATTCCCGCGCGCTACGCCTCGACACGGCTGCCCGCCAAGCCGCTGCTCGACCTCGGAGGAAG
GCCGATGGTCGTTCGCGTGGCAGAGCGCGCACTGCTGTCGGGTGCCGACGAAGTCCTGGTCGCCACCGATCACGCCGAAG
TTGTCGCCAGTGCCGAGCACTACGGCCTGCGGGTGCTGCTGACGCGGGCCGACCACGCGAGCGGCACGGATCGTCTGGCA
GAAGTCGTCGAACTGGCAGGCTGGAGTGACGACACGATAGTCGTCAACGTGCAAGGCGACGAGCCCCTGATCGATCCCGC
ACTGATCGCCATGACGGCAACCCGCCTGGCGACAAGCGGCGCCGAAATCGCCACGGTGGCGCACCCCCTGACCGATGCGG
CGGATTTCTTCAACCCGCACATCGTCAAGGTCGTCTGCGCCGCAGGCGGCGACGCGCTGTACTTCTCCCGCGCGCCCATT
CCCTACGCCCGCGACCACTTTGCCCGCGAAACCGGCGGTGAGACACTGCCGGCCGATATGCCGGCTTTCCGGCATATCGG
CCTGTACGCCTACCGTGCCCGCTTCCTGCGCACCTACTCCCGGCTGACCGCATCACCGCTGGAGGCCCTGGAAGCGCTGG
AACAGCTGCGCGCCCTGTGGCACGGTTTCCGCATCAGTGTGGCGATCGCCGATCACCTGCCAGGCGCGGGCGTGGACACT
CCCGAGGATGCACGAAGAATGCAGGAATGGTTCAAAAAGGTTTGA

Protein sequence :
MRFKVVIPARYASTRLPAKPLLDLGGRPMVVRVAERALLSGADEVLVATDHAEVVASAEHYGLRVLLTRADHASGTDRLA
EVVELAGWSDDTIVVNVQGDEPLIDPALIAMTATRLATSGAEIATVAHPLTDAADFFNPHIVKVVCAAGGDALYFSRAPI
PYARDHFARETGGETLPADMPAFRHIGLYAYRARFLRTYSRLTASPLEALEALEQLRALWHGFRISVAIADHLPGAGVDT
PEDARRMQEWFKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 5e-30 43
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-30 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-30 43
unnamed AAK15335.1 unknown Not tested Not named Protein 1e-21 41