|
Name : CAP2UW1_3453 (CAP2UW1_3453) Accession : YP_003168641.1 Strain : Candidatus Accumulibacter phosphatis UW-1 Genome accession: NC_013194 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 3970981 - 3973056 bp Length : 2076 bp Strand : - Note : KEGG: dar:Daro_0356 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases DNA sequence : ATGCCGACGGCGGACGAGATCGACGCGCCGCCGGCAATCAGGAGCAGGTTGCGCAAGCTCGGTATCGAACGACCGGACGA CCTCGTCCTCCATCTTCCCCTGCGCTACGAGGACGAGACGCGCGTCACGCCGATCGCCGAGGCGCCCGTCGGCTGGCCGG TGCAGGTCGAAGCCGTGGTTCTCGACGTCGCGCTCCGGCAGGCGCCTCGACGTCAGCTTGTGGCACGCGTCAGTGACGCC GGCGGCGAAGGCAGCACGCTCTTTCTGCGCTTCCTGAGTTTCTACGGCAGCCAGAAGAGCGGCCTGGAGGCAGCGCGCGA CGCCGGGCGCCGGCTGCGCATCTTCGGCGAGATACGCGACGGCTTCCTCGGCCGCGAGATGGTGCACCCGCGCTACCGTT TCCTGTCCGACGACGAGAACGGGGGCGAGAGCGACGTCGACGCGCTGCCGCCGTCGCTGACGCCGGTTTACCCGAGCACC GCCGGCCTGGCGCAGGGCACGCTGCGTCGCCTGATCGCGCGCGCGCTACGGGCTGCCGATCTGGCCGAGCTGCTGGCAGA CGGCTGGCGCGAGCAGCACGCGCTGCCATCGTTGCCGGCGGCGGTCGCGTTTCTGCACTCGCCGCCGCCGGCCGTCGACG AATCGGCGCTGCAGGCGCGCGCGCATCCGGCCTGGCGGCGAATCAAGTTCGACGAGTTGTTGGCGCAGCAACTGGCGCTG CGTCGCCTCTCGCTGGCGCGTCGGCGTCAGGGCGCGCCGGTGCTCGCCGTAGCCGGCGAACTCGCCCGTCGGCTGCAGGC GGCGCTGCCCTTTGCCCTGACCGGCGCCCAGCGGCGGGTCGCCGCCGAGATCGCCACCGACCTCGAACAAGCGCACCCGA TGCAGCGGCTGCTGCAGGGCGACGTCGGTTGCGGCAAGACGATCGTCGCCGCACTGGCCGCCTGCCAGGCGATCGAGGCC GGCTATCAGACGGCCTTCATGGCACCGACGGAGATCCTCGCCGAGCAGCACTACAGCAAGCTGCGCGCCTGGCTCGAGCC GCTCGGCATCGAGGTAAGCTGGCTGGCCGGCAGTCTCGGCGGCAAAGCCAGGCAGGCGAAGCGGCAACAGGTCGCGACGA GCGCGCAACTGGTCGTCGGTACGCACGCGCTGATCCAGGAAAGCATCGATTTCGCCCGTCTCGGCTTGGCGATCGTCGAC GAGCAGCATCGCTTCGGCGTCGTGCAGCGCCTCGAGTTGCGACGCAAGGGCGTCAATCCGCACCAATTGATGATGTCGGC GACGCCGATCCCGCGTACCCTGGCGATGAGCTACTACGCCGACCTCGACGTCTCGGTGATCGACGAACTGCCGCCGGGTC GCTCGCCGGTGAAGACCCGGTTGTTCTCGGACACGCGCCGGGCCGAAGTCATTGCGGCGGTACGCGCCGTCGTCGCTGGC GGCCGCCAGGCCTACTGGGTCTGCCCGCTGGTCGAGGAATCCGCGAAGCTCGAACTGCAGGCGGCACTCGACACCTGGGC TGCACTCACCGCCGAACTGAGCGATCTGCGCGTCGGTCTCGTCCATGGCCGCCTCAAGGGCGACGAGAAAGCAAGCGTGA TGGCCGCTTTCGTCGCCGGCGAGATCGACGTGCTGGTGGCGACGACGGTCATCGAAGTCGGCGTCGACGTGGCCAACGCC AGCCTGATGGTCATCGAGCACGCCGAGCGCTTCGGCCTGTCGCAGCTTCACCAGTTGCGTGGGCGAGTCGGTCGCGGCGC CGAGGAGTCGGTTTGCGTGCTGCTCTACCAGCAACCGCTGTCACGGACCGCACGGGCGCGGCTGAAGATCATCTTCGAGC ACACCGACGGCTTCGAGATCGCCAGACAGGATCTGCGCCTGCGTGGCCCCGGCGAGTTCATCGGCAGCCGCCAGTCGGGC GTGCCGTTGCTGCGCTACGCCGACCTCGAAAGCGATGCCGACCTCGTCGAACTGGCGCAGCAGATGGCGGTGCAGTGGCT GCGCAACGATCCCGAACGCGTCGGGCGTCACCTGCGGCGGTGGTTCGGCCAGCGCGAGGAGTTGCTCAGAGCCTGA Protein sequence : MPTADEIDAPPAIRSRLRKLGIERPDDLVLHLPLRYEDETRVTPIAEAPVGWPVQVEAVVLDVALRQAPRRQLVARVSDA GGEGSTLFLRFLSFYGSQKSGLEAARDAGRRLRIFGEIRDGFLGREMVHPRYRFLSDDENGGESDVDALPPSLTPVYPST AGLAQGTLRRLIARALRAADLAELLADGWREQHALPSLPAAVAFLHSPPPAVDESALQARAHPAWRRIKFDELLAQQLAL RRLSLARRRQGAPVLAVAGELARRLQAALPFALTGAQRRVAAEIATDLEQAHPMQRLLQGDVGCGKTIVAALAACQAIEA GYQTAFMAPTEILAEQHYSKLRAWLEPLGIEVSWLAGSLGGKARQAKRQQVATSAQLVVGTHALIQESIDFARLGLAIVD EQHRFGVVQRLELRRKGVNPHQLMMSATPIPRTLAMSYYADLDVSVIDELPPGRSPVKTRLFSDTRRAEVIAAVRAVVAG GRQAYWVCPLVEESAKLELQAALDTWAALTAELSDLRVGLVHGRLKGDEKASVMAAFVAGEIDVLVATTVIEVGVDVANA SLMVIEHAERFGLSQLHQLRGRVGRGAEESVCVLLYQQPLSRTARARLKIIFEHTDGFEIARQDLRLRGPGEFIGSRQSG VPLLRYADLESDADLVELAQQMAVQWLRNDPERVGRHLRRWFGQREELLRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-92 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CAP2UW1_3453 | YP_003168641.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 5e-135 | 52 |
