Gene Information

Name : CAP2UW1_0031 (CAP2UW1_0031)
Accession : YP_003165334.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 33698 - 35614 bp
Length : 1917 bp
Strand : +
Note : PFAM: thiamine biosynthesis protein ThiC; KEGG: dar:Daro_3921 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCTAACGACAAATTCATTGCTACCGATGCCCACGTAGATCAAGCAGCCATCAAGCCGCTGCCCAATTCGCGCAA
GGTTTACGTCACCGGTAGCCGCCCGGACATCCGGGTACCGATGCGCGAAATCTCCCAGTCGGACACGGACACAGCTTTTG
GGGGTGAGAAGAACCCGCCGATCTATGTTTACGACTGTTCGGGACCGTATTCGGATCCGCTGGCGAAGATTGACATCCGG
CAGGGGCTGCCGGCGCTGCGCGCGCGGTGGATCGCCGAACGAGGCGACAGCGAGCCGCTCGCCGATCTGAGTTCCGATTT
TGGACGCGTCCGCGCGGCCGATCGCGCTCTCGATGAAATGCGCTTCCCCGGACTGCAGCGGAGACCACAACGGGCCAGGG
CGGGTGCCAACGTCAGCCAGATGCACTACGCCCGGCGTGGCATCATCACGCCCGAGATGGAGTATGTCGCCATTCGCGAG
AACAACAACCGGCGCACCTATGTCGAGCAGCTGCGCGCCTCCGGCCCGCAGGGTGCGCGCCTGGCGGAGATTCTCTGTCG
TCAGCATCGCGGGCAGAGTTTCGGGGCCAGCCTCCCGGAGGAAGTCGTCCCGGACTTCGTTCGTTCTGAAGTTGCGCGCG
GCCGGGCGATCATTCCGTGCAACATCAACCATCCGGAAAGCGAGCCGATGATCATCGGCCGCAACTTCCTGACCAAGATC
AACGCCAACATCGGGAATTCGGCCCTCGGTTCGAGCATTCAGGAGGAAGTCGAGAAGATGACCTGGGCGATCCGCTGGGG
TGGCGACACGGTCATGGACCTGTCAACGGGCAAGAACATCCATGAGACGCGCGAGTGGATCATTCGCAACAGCCCGGTGC
CGATAGGGACCGTGCCCATCTATCAGGCGCTTGAGAAGGTTGACGGGAAGGCCGAAGACCTGACGTGGGAGATTTTCCGC
GACACCTTGATCGAGCAGGCTGAGCAAGGCGTCGACTACTTCACGATTCACGCCGGCGTGCTGCTGCGTTACGTGCCACT
GACGGCCAAACGTCTGACGGGCATCGTTTCGCGCGGTGGTTCGATCATGGCCAAGTGGTGCCTGGCCCACCACAAGGAAA
GCTTCCTGTACACGCACTTCGAGGAGATCTGCGAGATCATGAAGGCTTACGACGTTGCTTTCAGCCTCGGCGACGGCTTG
CGCCCCGGCTCCATCTACGATGCCAACGACGAAGCCCAGCTTGGCGAGTTGAAGACGCTCGGCGAGCTGACCGAGGTCGC
CTGGCGGCATGACGTTCAAGTGATGATCGAGGGACCGGGCCACGTGCCGATGCACATGATCAAGGAGAACATGGATCTGC
AGCTCGATTCGTGCAGAGAGGCACCGTTCTACACCCTGGGGCCGCTGACGACCGATATTGCTCCCGGCTACGACCACATC
ACCAGTGGTATCGGCGCTGCGATGATCGGGTGGTTCGGCACAGCGATGCTCTGCTACGTGACACCGAAGGAGCACCTTGG
TCTGCCGGACAAGGACGACGTGAAAGAGGGGATCATTACCTACAAGCTGGCGGCGCATGCGGCAGATCTGGCAAAAGGTC
ACTCGGGTGCGCAGATTCGCGACAATGCTTTGTCGAAAGCGCGTTTCGAGTTTCGCTGGGAGGACCAATTCAACCTGGGC
CTCGATCCCGAAAAAGCACGCGAGTTTCATGACGAAACCTTGCCCAAGGATTCGGCAAAGGTGGCGCATTTCTGCTCGAT
GTGCGGGCCGCATTTCTGCTCGATGAAGATCACCCAGGAAGTGCGGGACTTCGCCGTGGCGCAAGGGCTTACGGCGAGTG
AAGCGCTGACCAGAGGGATGGAGGTGAAGGCGGTCGAGTTCGTCAAGGCGGGTGCGGAGGTCTATCACAAGCTCTGA

Protein sequence :
MNANDKFIATDAHVDQAAIKPLPNSRKVYVTGSRPDIRVPMREISQSDTDTAFGGEKNPPIYVYDCSGPYSDPLAKIDIR
QGLPALRARWIAERGDSEPLADLSSDFGRVRAADRALDEMRFPGLQRRPQRARAGANVSQMHYARRGIITPEMEYVAIRE
NNNRRTYVEQLRASGPQGARLAEILCRQHRGQSFGASLPEEVVPDFVRSEVARGRAIIPCNINHPESEPMIIGRNFLTKI
NANIGNSALGSSIQEEVEKMTWAIRWGGDTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEDLTWEIFR
DTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRLTGIVSRGGSIMAKWCLAHHKESFLYTHFEEICEIMKAYDVAFSLGDGL
RPGSIYDANDEAQLGELKTLGELTEVAWRHDVQVMIEGPGHVPMHMIKENMDLQLDSCREAPFYTLGPLTTDIAPGYDHI
TSGIGAAMIGWFGTAMLCYVTPKEHLGLPDKDDVKEGIITYKLAAHAADLAKGHSGAQIRDNALSKARFEFRWEDQFNLG
LDPEKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQEVRDFAVAQGLTASEALTRGMEVKAVEFVKAGAEVYHKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72