Gene Information

Name : CAP2UW1_3059 (CAP2UW1_3059)
Accession : YP_003168261.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3523096 - 3524010 bp
Length : 915 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dar:Daro_0537 tyrosine recombinase XerD subunit

DNA sequence :
ATGAAGGCTGCTGAGGCGGATCCCGCCGATCTGGCCGAGATCGACGCCTTCTGCGACACGCTCTGGCTCGAGGACGGGCT
GGCCAAGGCGTCACTGAGCAGCTACCGCAGCGACCTCGGGCAACTTGCGGGCTGGCTCGCCGAACAGCGGCTCGGCTCCC
TGTGCGGCATCGACGAAGCGACGCTGCTGCGTTTTGTCGCCACGCTCGCGCAGACACTGCGCGCCTCCTCACAGGCCCGC
TACCTGTCGACGCTGCGCCGCTTCTATCGTCATCAAGTGGCGCACGGCCGGCGGAGCAGCGATCCGACGCTGCGCATCGC
CATGCCGGTGAAGCCGTCGCGCTTGCCGAAAGTTCTTTCCGAGTTGCAGGTCGAGCGCCTGCTCGGCGCGCCGCCGAGCG
AGACACCGCTTGGCCAGCGCGATCGGGCGATGCTCGAAACTCTCTATGCGACCGGCCTGCGCGTTTCCGAACTGGTGGGC
CTCAAACTGCACGAGGTCAGTCTCGACATGGGCGTCGTGCGTGTTTTCGGCAAGGGTGCCAAGGAGCGACTTGTCCCGCT
GGGCGAGGAGGCGCGCGACTGGCTGCGTCGCCATCTCGCCGACGGGCGGCTGGCGCTGCTCGCGGGACGCCAGTCCGACG
ACGTCTTCGTCACCGCGCGCGGCGCGGCGATGACTCGGCAGGCTTTCTGGCAACTGATCAAGCGTTACGCGCTGCAGGCC
GGGATGGATCCGGCCCGCCTGTCACCGCACGTGCTGCGCCACGCCTTCGCCACGCACCTGCTGAACCACGGTGCCGATCT
GCGCGTCGTGCAACTCCTGCTCGGTCACTCGGACATCTCGACGACGCAGATCTACACGCACGTCGCCCGCGAACGGCTCA
AGATTCTGCACGCCCAGCACCACCCGCGTGGTTGA

Protein sequence :
MKAAEADPADLAEIDAFCDTLWLEDGLAKASLSSYRSDLGQLAGWLAEQRLGSLCGIDEATLLRFVATLAQTLRASSQAR
YLSTLRRFYRHQVAHGRRSSDPTLRIAMPVKPSRLPKVLSELQVERLLGAPPSETPLGQRDRAMLETLYATGLRVSELVG
LKLHEVSLDMGVVRVFGKGAKERLVPLGEEARDWLRRHLADGRLALLAGRQSDDVFVTARGAAMTRQAFWQLIKRYALQA
GMDPARLSPHVLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKILHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-51 49
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-51 49