Gene Information

Name : CAP2UW1_0278 (CAP2UW1_0278)
Accession : YP_003165564.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Virulence
Product : Redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 340095 - 340598 bp
Length : 504 bp
Strand : +
Note : PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dar:Daro_0532 thiol peroxidase (atypical 2-Cys peroxiredoxin)

DNA sequence :
ATGGCAAGTACAGTGACTCTCGGCGGCAAGCCGTTTCAGGTTGGCGGCATTCTTCCGGAAAAAGGCCAGACGGCACCTGC
CTTCACACTGGTCGGCAAGGATCTCGCCAACGTCTCGTTGAGCAGTTTTGCAGGCCAGCGCAAGGTTCTGAACATCTTTC
CGAGCATTGACACGCCGACCTGCGCAACGTCGGTGCGCAAGTTCAACGAGAAAGCGAGTGGGCTGAGCAATACGGTGGTG
CTCTGCGTTTCCGCCGATCTGCCCTTTGCGCAGGCGCGCTTCTGCGGTGCCGAGGGACTCGAGCGAGTCGTCACGCTGTC
CACGATGCGCGGCCGCGAGTTCCTCGAAGCCTACGGCGTGGCGTTGAGTGACGGCCCACTGGCCGGCCTCGCCGCTCGCG
CGGTGGTCGTTCTCGATGGCGATGACAAAGTGCTGCACAGCGAATTGGTTGCCGAGATCAAGAATGAGCCCGATTACGAC
GCGGCGCTGAAGTCTCTGGCCTGA

Protein sequence :
MASTVTLGGKPFQVGGILPEKGQTAPAFTLVGKDLANVSLSSFAGQRKVLNIFPSIDTPTCATSVRKFNEKASGLSNTVV
LCVSADLPFAQARFCGAEGLERVVTLSTMRGREFLEAYGVALSDGPLAGLAARAVVVLDGDDKVLHSELVAEIKNEPDYD
AALKSLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-26 49
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-26 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-26 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-26 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_0278 YP_003165564.1 Redoxin domain-containing protein VFG0087 Protein 9e-27 49