Gene Information

Name : CAP2UW1_2263 (CAP2UW1_2263)
Accession : YP_003167483.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 2577825 - 2579270 bp
Length : 1446 bp
Strand : +
Note : KEGG: dar:Daro_1220 primary replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase

DNA sequence :
ATGGCCAGGTCGTTCGATTCATCCCTCTCCGAGGACGGGCAGCGCGCGAACAATCGCACGGGGCGGCGCGAGCGCGGTCC
ACAAGCGGACTCGGTGCTTTCCGAGTTGCGCGTGCCACCGCACTCGCTGGAAGCCGAGCAGTCGGTCCTCGGTGGCTTGC
TGCTCGACAATGCCGCTTTCGACAAGATCGCCGATCTGATCGCGGAGGGCGATTTCTACCGCGACGAGCACAGGCGGATT
TACCGCCAGATTCGCAAGCTGCTCGAGCGCGGCAAGCCGGCCGATGCGGTGACGGTTGCCGAGAGTCTCGAGCAGGCAGG
CGAGGGCAAGGAGACCGGGGGCCTGGCCTACCTGGGTGAACTGGCGGCCAATACGCCGTCGGCGGCGAACATCCGGCGCT
ACGCCGAGATCGTTCGCGAACGGGCGATTCTGCGGCAATTGGTGACCGCCGGCGACGAGATCGCCGGGAGTGCGCTGAAC
CCGCTGGGTCGCGACCCGAAGACGCTGCTCGACGAGGCCGAGGCGAAGGTTTTCGCGATTGCCGAAGGTGGTTTTCGCCA
CCAGAGCGGCTTTGTGCACATCAATCCGCTGCTCACGCAAGTGGTCGAGCGCATTCAGGAACTGCACGATCGCGACAATC
CGTCGGACATCACCGGCGTGCCGAGCGGCTATCACGACCTCGACGGCAAGACCTCCGGCCTGCAGGGGGGCGACCTGCTG
ATCGTTGCCGGGCGTCCGTCGATGGGCAAGACCTCGTTCGCGCTGAACATCGCCGAGCATGTGGCGATCGAAGTGGGGCT
GCCGGTGGCCATTTTTTCGATGGAGATGGGCGGCACGCAGTTGGCCATGCGGATGCTCTCTTCGGTGGGGCGGCTCGATG
CGCATCGTGTGCGTACCGGTCGCCTCAACGACGATGAATGGTCGCGCTTGTCCTTTGCGCTGGGCAAGATGCACGAGGCG
CCGATCTATATCGACGAGACGCCGGCGCTCAATCCGATCGACCTGCGCGCGCGCGCGCGCCGTCTGCACCGCCAATGCGG
CCAGCTCGGGCTGATCGTTGTGGACTATCTGCAGTTGATGTCGGCGACGTCGCACGGTGAGAACCGGGCTACCGAAATCT
CGGAAATTTCGCGCTCACTGAAGGGCCTGGCCAAGGAACTGGGCGTTCCCCTGATGGCGCTCTCGCAGCTTAATCGTTCG
CTCGAGCAACGGCCGAACAAGCGGCCGGTAATGTCGGATCTGCGTGAGTCGGGCGCCATCGAGCAGGATGCAGACGTGAT
CATGTTCATCTATCGCGACGAGGTCTACAGTCCGGATACGCCCGACAAGGGGATTGCCGAGATCATCATCGGCAAACAAC
GGAACGGGCCGATCGGTACCGTGCGCCTGACTTTTCTGGGCGAGTACACGCGCTTCGAGAATTTCGCCAGTCCGGGTGCC
TACTGA

Protein sequence :
MARSFDSSLSEDGQRANNRTGRRERGPQADSVLSELRVPPHSLEAEQSVLGGLLLDNAAFDKIADLIAEGDFYRDEHRRI
YRQIRKLLERGKPADAVTVAESLEQAGEGKETGGLAYLGELAANTPSAANIRRYAEIVRERAILRQLVTAGDEIAGSALN
PLGRDPKTLLDEAEAKVFAIAEGGFRHQSGFVHINPLLTQVVERIQELHDRDNPSDITGVPSGYHDLDGKTSGLQGGDLL
IVAGRPSMGKTSFALNIAEHVAIEVGLPVAIFSMEMGGTQLAMRMLSSVGRLDAHRVRTGRLNDDEWSRLSFALGKMHEA
PIYIDETPALNPIDLRARARRLHRQCGQLGLIVVDYLQLMSATSHGENRATEISEISRSLKGLAKELGVPLMALSQLNRS
LEQRPNKRPVMSDLRESGAIEQDADVIMFIYRDEVYSPDTPDKGIAEIIIGKQRNGPIGTVRLTFLGEYTRFENFASPGA
Y

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-100 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-88 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 8e-89 48
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-88 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-86 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-86 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-84 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-86 46
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-74 43