Gene Information

Name : CAP2UW1_1979 (CAP2UW1_1979)
Accession : YP_003167204.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2230922 - 2231632 bp
Length : 711 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_1167 ABC transporter related

DNA sequence :
ATGCCGCCGGCGATCATTCGCGTCGTTGCGCTCGGCAAATCCTACAGCACGGCTGCCGGACCCTTCCCGGCACTCAGGGG
CGTCGATCTGAACGTCGAGCCAGGCGAGTTCGTGGCCATCATGGGCCCCTCGGGATCCGGCAAGTCCACCTTCATGAACC
TGCTCGGCTGTCTCGATACGCCGAGCAGCGGTGACTACTTCCTGGTCGAACGTAACGTCGCCCACCTCGGCAAGGACGAA
CTCGCGGCGTTGCGCAACCGGACCATCGGCTTCGTCTTCCAGGGCTTCAATCTTCTGCCGCGGATGACGCTCGAAGACAA
CGTCGCCTTGCCGCTGGTGTACTCGGGCATCGCGCGCGAGCAGCGGCGGCTGCGGGCCCGCCAGGAACTGGAGCGCGTCG
GCCTCGGCGATTACGCCGGCTCGCTGCCAAGCAGGATTTCCGGTGGCCAGCAGCAACGTGTCGCGATTGCCCGCGCGCTC
GTCAATACGCCGCAACTGATCCTCGCCGACGAGCCGACCGGCAACCTGGACAGCCGTACCAGCGAAGAAATCATGACGCT
GTTTTTCGACCTCAACCGCGAGGGAATCACCATCGTCCTGGTGACCCACGAGCCGGATATCGCCGCGCACGCCCGACGGC
AGGTGCGCTTCCTCGACGGACTGATCGTCAGCGACGTCGCCACACCGGCACGAGCGTCCAACGCATGCTGA

Protein sequence :
MPPAIIRVVALGKSYSTAAGPFPALRGVDLNVEPGEFVAIMGPSGSGKSTFMNLLGCLDTPSSGDYFLVERNVAHLGKDE
LAALRNRTIGFVFQGFNLLPRMTLEDNVALPLVYSGIAREQRRLRARQELERVGLGDYAGSLPSRISGGQQQRVAIARAL
VNTPQLILADEPTGNLDSRTSEEIMTLFFDLNREGITIVLVTHEPDIAAHARRQVRFLDGLIVSDVATPARASNAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-29 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-30 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_1979 YP_003167204.1 ABC transporter NC_012469.1.7686878. Protein 5e-52 55
CAP2UW1_1979 YP_003167204.1 ABC transporter NC_008702.1.4606598. Protein 1e-39 46
CAP2UW1_1979 YP_003167204.1 ABC transporter CP001581.1.gene798.p Protein 2e-34 42
CAP2UW1_1979 YP_003167204.1 ABC transporter CP001581.1.gene598.p Protein 3e-37 42