Name : CAP2UW1_0118 (CAP2UW1_0118) Accession : YP_003165407.1 Strain : Candidatus Accumulibacter phosphatis UW-1 Genome accession: NC_013194 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 137151 - 139082 bp Length : 1932 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mms:mma_2254 nucleo DNA sequence : ATGATGAAAGCCTTCTTGTCCCTGTCGCGTGGCCGCAAGCAGGCGGTGGCGATCGTCACCGACTTCGCGCTGCTCCTGCT GGCCTTGTGGTCGGCGCTGGCGCTGCGCTTCGAAACGTGGACTCCCAGCTTCGCCACCTATGGATGGCAGGTGCTGGCTG CACCCCTACTGGCGATTCCCATCTTCATTCGCCTGGGCCTGTACCGGGCAGTTATCCGCTTCATGGAGGACCGGGTTGTT TTCGTGGTCACCGGCGGCGTGGCCCTGTCGGTCGTCCTGTTGGCGGCCGGTATAGCCCTGACCCATACGCCAGGACTTTC GCGTGGTGTTCTCGGGATTTATTGCATGTTGGCCATCCTCTACGTCGGCACCGCGAGGTTCCTGGCGCGCAGCTATTTCC TGCGTGCAGAACGCGCCGAGGATTCGCGCAAGCGGGTGGCCATTTATGGTGCCGGTAGTGCGGGAACACAGTTGGCTTAC GCCTTGCGTGCTGGTCGGGAGTACCTGCCGGTGGCTTTCGTTGACGACAATGCGGCTTTGCAGCGAATTGAAGTCGCCGG TTTGCGGGTTCAGTCGCCCGATCAGTTGATGCCCATGATGGCTGCCGGGCGCATCGAGGAGGTGCTGCTGGCAATCCCGT CAGCCAGTCGGTCACGCCGGGCGGAGATCATCGGCAGCCTCGAGGGTCTCCATTGCAAGGTCAGGCTGGTTCCCGGCATG GCGGATGTGGTGAGCGGCAACGTGACGGCCGACGCCATCCGGGAGGTCGAAATCGAGGACCTGCTGGGTCGCGAATCCGT GGCGCCCGACGCGGCATTGCTGGGTCGCTGCGTCACGGGGAAGGTGGTAATGGTTTCCGGGGCTGGCGGCTCGATCGGCG CGGAACTCTGCCGACAGATTGTCCAGCTGCGACCCAGCCGCCTGGTCCTGATGGAGCGTTCCGAGTTTGCCCTCTATTCG ATCGAGCAGGAGTTGGCCACGCTCTGCGTGGGCGGCAGTGCGTGCGTCGAACTCGTGCCCGTACTGGGTTCGGTACTTCA CCAGAAGCGCAACGAAATGGTGATGAAGAGTTTCGGAGTGCAAACGGTCTACCATGCGGCCGCCTACAAACATGTCCCTC TGGTCGAGCATAACCCGATCGAGGGCCTGCGCAACAATGCCGTGGGCACGCGGCGAATGGCCGAAGCGGCGCTGGCGGCC GGCGTCGGCACCTTCGTTCTGATCTCGACCGACAAGGCGGTACGTCCGACCAATGTGATGGGCGCCAGCAAGCGGCTTGC CGAGCTCATCCTGCAGGCATTGGCGCGAAGCGGTGGAGGCACGCGTTTCTGCATGGTGCGCTTTGGCAATGTGCTGGGTT CCTCCGGATCGGTCGTGCCCCTCTTTCGCCGGCAGATCGCCGCCGGCGGCCCGATCACCCTGACGCACGCCGAGATCACG CGCTACTTCATGACCATCCCCGAGGCGGCACAACTCGTCATTCAGGCGGGATCGATGGGTGAAGGCGGCGAAGTCTATGT TCTGGACATGGGGAAGCCTGTTAGAATCATTGACCTTGCTCGCCGCATGGTGCACCTGAGCGGTCTCGAGGTGCGCGACG AAGAGCATCCCGACGGTGACATTGCCATCGAAGTGGTTGGTCTGCGCCCCGGCGAGAAGCTCTACGAAGAGTTGCTGATC GGCGAGAACGTCGAAGGAACGACGCATCCGCTGATCATGCGGGCGCATGAGCATGAGCTTCCGTGGGCGTTGCTGGCCGA GCGGCTGGCGGTCATGGACGATGCCTGCCAGCGCTTCGACTACGAGCAAGCACTGGCCTTGCTGGTTTCATTGGTGAAGG AATACTCACCGGCACCGCACGGCGATGGCGACGGCGAGTTGTTATGGAATGCGATGACCAGACCCGGCCGCGGCGAGGTT GTCGTACATTGA Protein sequence : MMKAFLSLSRGRKQAVAIVTDFALLLLALWSALALRFETWTPSFATYGWQVLAAPLLAIPIFIRLGLYRAVIRFMEDRVV FVVTGGVALSVVLLAAGIALTHTPGLSRGVLGIYCMLAILYVGTARFLARSYFLRAERAEDSRKRVAIYGAGSAGTQLAY ALRAGREYLPVAFVDDNAALQRIEVAGLRVQSPDQLMPMMAAGRIEEVLLAIPSASRSRRAEIIGSLEGLHCKVRLVPGM ADVVSGNVTADAIREVEIEDLLGRESVAPDAALLGRCVTGKVVMVSGAGGSIGAELCRQIVQLRPSRLVLMERSEFALYS IEQELATLCVGGSACVELVPVLGSVLHQKRNEMVMKSFGVQTVYHAAAYKHVPLVEHNPIEGLRNNAVGTRRMAEAALAA GVGTFVLISTDKAVRPTNVMGASKRLAELILQALARSGGGTRFCMVRFGNVLGSSGSVVPLFRRQIAAGGPITLTHAEIT RYFMTIPEAAQLVIQAGSMGEGGEVYVLDMGKPVRIIDLARRMVHLSGLEVRDEEHPDGDIAIEVVGLRPGEKLYEELLI GENVEGTTHPLIMRAHEHELPWALLAERLAVMDDACQRFDYEQALALLVSLVKEYSPAPHGDGDGELLWNAMTRPGRGEV VVH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 45 |
SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-83 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
CAP2UW1_0118 | YP_003165407.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 3e-133 | 55 |