Gene Information

Name : CAP2UW1_0117 (CAP2UW1_0117)
Accession : YP_003165406.1
Strain : Candidatus Accumulibacter phosphatis UW-1
Genome accession: NC_013194
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 136473 - 137039 bp
Length : 567 bp
Strand : +
Note : PFAM: sugar transferase; KEGG: pna:Pnap_3481 sugar transferase

DNA sequence : 
ATGTCGATGAAGCGCTTTTTCGATCTGCTGCTCGGTCTGTGCACCGCTACCGTTCTCGCCTTGCCCATTCTGATCGTTGC
CGTCCTCGTGCGCCTCACTTCGAGGGGGCCGGCCCTGTACTGGTCGGATCGCGTGGGCAAGGGGAATGCCATCTTCCGGA
TGCCGAAGTTTCGCAGCATGCGCGTCGGTGCACCGACCGTAGCCACGCATTTGCTGCAGAATCCGGAGGCATACCTGACG
CCGATCGGCTCTTTCCTGCGGCGATCCAGCCTCGACGAATTACCTCAGTTGTGGAGCATCCTTGTGGGTGACATGAGTTT
TGTCGGGCCACGACCGGCGTTGTTCAATCAGCAGGATCTGGTCGCCCTGCGTACCGAGTATGGGGTGCATCGCTTGCTGC
CCGGGTTGACGGGCTGGGCTCAGGTTAACGGCCGCGATGAATTGCCGATTCCCGAAAAGGTCAGGCTGGATGTCGAATAC
TTGCAGCGCGCCTCGCTGACGTTCGATATTCACATCCTCTGGCTGACCGCCGTCAAGGTTCTCAGGCGTGAAGGCGTGTC
GCACTGA

Protein sequence : 
MSMKRFFDLLLGLCTATVLALPILIVAVLVRLTSRGPALYWSDRVGKGNAIFRMPKFRSMRVGAPTVATHLLQNPEAYLT
PIGSFLRRSSLDELPQLWSILVGDMSFVGPRPALFNQQDLVALRTEYGVHRLLPGLTGWAQVNGRDELPIPEKVRLDVEY
LQRASLTFDIHILWLTAVKVLRREGVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-32 45
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_0117 YP_003165406.1 sugar transferase VFG1369 Protein 7e-30 50
CAP2UW1_0117 YP_003165406.1 sugar transferase VFG1309 Protein 3e-31 44