Gene Information

Name : CAP2UW1_4716 (CAP2UW1_4716)
Accession : YP_003165286.1
Strain :
Genome accession: NC_013193
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 148011 - 148571 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence :
TTGAAAGGTCAACGCATCGGGTACGTGCGGGTCAGCAGCTTCGATCAGAACCCGGATCGCCAGCTTGAGCAGGTCCAGGT
GGACAAGGTATTCACCGACAAGGCGTCGGGCAAAGATACGCTGCGCCCGCAGCTCGACACGCTGCTGACCTTCGTGCGCG
AAGGCGATACCGTGGTGGTGCACAGCATGGATCGCCTGGCGCGCAACCTCGATGACTTGCGCCGCCTCGTGCAAAAGCTC
ACCAAGCGCGGCGTACGAATTGAGTTCGTCAAGGAATGCCTGACCTTCACCGGCGAGGATTCGCCGATGGCCAATCTGAT
GCTGTCCGTGATGGGTGCATTCGCCGAATTCGAGCGTGCCCTGATCCGCGAGAGGCAGCGCGAGGGCATTGCGCTGGCTA
AGCAGCGCGGTGCCTACCGGGGCCGCAAGAAAGCCCTGTCGCCAGAGCGTGCGGCCGAGTTACGTCAACGGGCCGACGCA
GGCGAACAAAAGTCGAAACTGGCGCGCGAGTTCGGCGTCAGTCGGGAGACCCTGTATCAATACTTGAGAACGGATCAGTA
A

Protein sequence :
MKGQRIGYVRVSSFDQNPDRQLEQVQVDKVFTDKASGKDTLRPQLDTLLTFVREGDTVVVHSMDRLARNLDDLRRLVQKL
TKRGVRIEFVKECLTFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSPERAAELRQRADA
GEQKSKLAREFGVSRETLYQYLRTDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 3e-66 87
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-66 84
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-66 84
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-66 84
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 4e-63 82
res YP_005124341.1 DNA-invertase Not tested Not named Protein 4e-23 49
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 2e-11 42
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 2e-11 42
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 2e-11 42
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 2e-11 42
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 2e-11 42
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 2e-11 42
res AGF34985.1 resolvase Not tested SGI1 Protein 3e-15 41
res AGF35025.1 resolvase Not tested SGI1 Protein 3e-15 41
res AGF35059.1 resolvase Not tested SGI1 Protein 3e-15 41
res AGK06929.1 resolvase Not tested SGI1 Protein 3e-15 41
res AGK06966.1 resolvase Not tested SGI1 Protein 3e-15 41
res AGK07012.1 resolvase Not tested SGI1 Protein 3e-15 41
res AGK07070.1 resolvase Not tested SGI1 Protein 3e-15 41
res AAK02044.1 resolvase Not tested SGI1 Protein 3e-15 41
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 3e-15 41
resX ADZ05759.1 invertase/resolvase Not tested AbaR10 Protein 4e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAP2UW1_4716 YP_003165286.1 hypothetical protein VFG1030 Protein 5e-67 84