Gene Information

Name : Lebu_0213 (Lebu_0213)
Accession : YP_003163124.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Unknown
Product : transposase IS200 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 218877 - 219275 bp
Length : 399 bp
Strand : +
Note : PFAM: transposase IS200-family protein; KEGG: ctc:CTC00621 transposase

DNA sequence :
ATGTCATATAATAGTAATTATCATTCAGTATTTGATATAAATTATCATATGATTTTTTGTATAAAATATCGAAGAGAAGT
CATTAATGATGAAATTTCTAATAGATTGAAAGAGATTTTTGAAAAAATATGTCCGAAGTATAACATTGTTCTTAAAGAAT
GGGAACATGATGTTGATCATATTCATATGTTGATTAATGCTATGCCTAATACTGAACTTTCTAAGTTTGTAAATACTTAC
AAAAGTGCTTCCAGCAGGTTGATAAAAAAAGAATTTCCTGAAATAAGGAGAAGATTGTGGAAAGAATATTTTTGGAGTAG
AAGTTACTTAGTTGTAAGTGTTGGAGGTGCACCGTTAGAGATAATTAAAAAATATATTCAAAATCAAAAGGAGGTGTAA

Protein sequence :
MSYNSNYHSVFDINYHMIFCIKYRREVINDEISNRLKEIFEKICPKYNIVLKEWEHDVDHIHMLINAMPNTELSKFVNTY
KSASSRLIKKEFPEIRRRLWKEYFWSRSYLVVSVGGAPLEIIKKYIQNQKEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 1e-22 44
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 5e-21 43
CPR_0625 YP_697952.1 ISCpe2, transposase orfA Not tested Not named Protein 3e-13 41