Gene Information

Name : Lebu_1838 (Lebu_1838)
Accession : YP_003164694.1
Strain : Leptotrichia buccalis DSM 1135
Genome accession: NC_013192
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 1932752 - 1933471 bp
Length : 720 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC0112 glutamine ABC transporter ATP- binding protein

DNA sequence : 
ATGATAAAAGTAAAAAATTTAAAAAAACAATTTGGAAATAACGTTGTTTTGAAAGATATAAGTGTAGCAATAGAAAAAGG
GGAAGTTATAAGTGTAATTGGGCCTTCTGGATCAGGAAAAAGTACATTTTTAAGATGTATAAATGGACTTGAGGAATTTG
ACGGAGGACATATTTTGGTAGATAATGAGGATATGGCTGATAAAAATTTGAATATTGATAAATTGAGAGAAAAAATAGGA
ATGGTTTTCCAGTCGTTTAATTTATTTCCACATTTAACAGTTTTGGAAAATATTATTTTAGCCCCAGTTACATTAAAAAA
AATGAGCAAAGAAGAAGCTAAAGTCAAAGCTAAAGAACTTCTAAAAAAAGTAGGGCTTGAAGAAAAGGCGGATTTTTATC
CATCCAGTTTGTCTGGAGGGCAAAAACAAAGAGTTGCAATAGCAAGAGCATTGGCAATGAATCCTGAAGCAATATTATTT
GACGAGCCAACTTCAGCTCTAGATCCTGAAATGGTAGGAGAAGTGCTGCAAGTAATGAAATCGCTGGCAAAAGACGGAAT
GACAATGGTTGTTGTAACGCATGAAATGGGATTTGCAAGGGAAGTGTGCGACAGGGTAATTTTTATGGCTGATGGAGAAA
TTGTGGAGCAAGGAAGTCCAAATGACGTATTTTTGAATCCACAGCACGAAAGAACTCAAAATTTCTTAAAAGTATTATAA

Protein sequence : 
MIKVKNLKKQFGNNVVLKDISVAIEKGEVISVIGPSGSGKSTFLRCINGLEEFDGGHILVDNEDMADKNLNIDKLREKIG
MVFQSFNLFPHLTVLENIILAPVTLKKMSKEEAKVKAKELLKKVGLEEKADFYPSSLSGGQKQRVAIARALAMNPEAILF
DEPTSALDPEMVGEVLQVMKSLAKDGMTMVVVTHEMGFAREVCDRVIFMADGEIVEQGSPNDVFLNPQHERTQNFLKVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-31 41
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lebu_1838 YP_003164694.1 ABC transporter NC_008702.1.4606598. Protein 6e-21 44
Lebu_1838 YP_003164694.1 ABC transporter NC_012469.1.7686878. Protein 7e-23 41